Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq27 118 1e-21 seq31 93.3 4e-14 >seq27 Length=1864556 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | | ||| ||||||| || || |||||||||||||||||||| Sbjct 1617732 CCACCTCTTAATCTGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTATAATCAGAT 1617673 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| || |||||| | ||||||||||| | || || | ||| |||||||| || Sbjct 1617672 AATGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATAAGTCTTTGTTGATCGGGTGGA 1617613 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| ||| |||| | ||||| | ||| | ||||| | || || Sbjct 1617612 ATACCTTCTTTGTC-TTGAATTTTGGCTTTTACATTTTCAATGGTGTCTGAACCTTCAAC 1617554 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| ||| | || || || || || || ||||| || ||||||||| Sbjct 1617553 TTCAAGGGTAATTGTTTTACCAGTTAAGGTCTTTACAAAAATTTGCATA 1617505 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | | ||| ||||||| || || ||||||||||||||||| ||| Sbjct 1695711 CCACCTCTTAATCTGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTATAGTCGGAT 1695770 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | |||||||||||| | || || | ||| || ||||| || Sbjct 1695771 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGGTCGGGTGGG 1695830 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || ||| |||| | ||||| | ||| | || || | || || Sbjct 1695831 ATACCTTCTTTATC-TTGAATTTTGGCTTTTACATTTTCAATAGTATCTGAACCTTCAAC 1695889 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| ||| | || || || || || || || || || ||||||||| Sbjct 1695890 TTCAAGGGTAATTGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATA 1695938 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | | |||||| || | || || |||||||||||||| ||||| Sbjct 1618188 CCACCTCTTAATCTGAGAACTAAATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGAG 1618129 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| | |||||||| ||| |||| | | ||| || ||||| || Sbjct 1618128 AGGGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCGGGTGGA 1618069 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| ||| |||| | ||||| | ||| | || || | || || Sbjct 1618068 ATACCTTCTTTGTC-TTGAATTTTGGCTTTTACATTTTCAATGGTATCTGAACCTTCAAC 1618010 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| ||| | || || || ||||| || ||||| || ||||||||| Sbjct 1618009 TTCAAGGGTAATAGTTTTACCAGTCAAGGTCTTTACAAAAATTTGCATA 1617961 >seq31 Length=145395 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 |||||| || | || || ||||||||||||||||| || | || | ||||| Sbjct 8514 AACTAAATGTAGTGTTGATTCTTTTTGAATGTTATAGTCAGATAAAGTACGACCATCTTC 8573 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 | |||||||||||| | || || | ||| || ||||| || || || ||||| || Sbjct 8574 CAATTGTTTACCAGCAAAAATAAGTCTTTGTTGGTCGGGTGGGATACCCTCTTTATCTTG 8633 Query 139675 GATTTTTTGTTTTAGCTGTTCCACTG-TGTCGGTGGGCTCCACCTCAACGGTCACCGTCT 139733 |||||| |||||| | || || || | || | || ||||| | ||| | |||| Sbjct 8634 GATTTTG-GTTTTAACATTTTCAATGGTATCAGAACCTTCTACCTCTAAGGTAATTGTCT 8692 Query 139734 TGCCGGTCAACGTTTTTACGAATATTTGCATAGCTTAT 139771 | || ||||| || ||||| |||||||||||| |||| Sbjct 8693 TACCAGTCAAAGTCTTTACAAATATTTGCATAATTTAT 8730 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 |||||| || | || || |||||||||||||| ||||| | || | || || Sbjct 7829 AACTAAATGGAGTGTTGATTCTTTTTGAATGTTGTAATCAGAGAGAGTACGACCATCCTC 7888 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 || |||||||||||| |||| || | ||| || ||||| || || ||||||||||| | Sbjct 7889 AAGTTGTTTACCAGCAAAGATAAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTGTC-TT 7947 Query 139675 GATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCT 139733 || |||| || |||| | ||| | || || | || || || | || | |||| Sbjct 7948 GAATTTTGGTCTTTACATTTTCAATGGTATCAGAACCTTCAACTTCCAAAGTAATTGTCT 8007 Query 139734 TGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || ||||| ||||| || || ||||||||| Sbjct 8008 TACCAGTCAATGTTTTGACAAAGATTTGCATA 8039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063665156800