Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq33 201 2e-46 seq36 179 5e-40 >seq33 Length=884058 Score = 201 bits (222), Expect = 2e-46 Identities = 1095/1730 (63%), Gaps = 73/1730 (4%) Strand=Plus/Minus Query 78858 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTC 78917 ||| || || || || || ||||| |||||||| | || | | ||||| ||| || Sbjct 112001 TTGGTCAATAAAAGCACCTCTGTCAGCAGCCATATCAATCAAGGCTCTTTGTTTAATCTC 111942 Query 78918 CCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGA 78974 ||||| || || |||| | | || | ||| ||||||| | || |||| |||| || Sbjct 111941 CCAAACTGTCTTGTAAAGTTGTTTCAAATCCTCTGGAATCTCTGGAATATTTTGAACAGA 111882 Query 78975 TCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT--CCATAATTTTCTCTCGGTT 79032 |||| | ||| |||||| | || || | || |||| ||| | | ||| | Sbjct 111881 ACCACGGTGTGCTATAATCTTGTTTTTCAAGTC--CATTGACCACAGTCCAAGCTCCATA 111824 Query 79033 AAAACTCTAAGGAGATGCGGATTAACTACTTG-AAATTCTCCAGACAATACTCTCCGAGT 79091 | | | ||| | ||| ||||| || ||| |||||| || | || ||||| | | Sbjct 111823 AGATCAGAAAGCAATTGCTTATTAA-TAATTGTAAATTCACCTGCTAAGACTCTTCTGGA 111765 Query 79092 GTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGA 79151 || || ||||| || |||||||| | | ||||| || || ||||||||| || || Sbjct 111764 ATATATGTTACTAGTGTATGGTTCAAAAGCCTCATTGTTACCTAAAATTTGACTGGTGGA 111705 Query 79152 TGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATC 79211 || || ||||| || || | || | ||||||||||||| | ||| | || Sbjct 111704 GGCTGTGGGCATTGGGGCTATTAAAAGTGAGTTTCTAAGACCGTGTTTGGCGATATCTTC 111645 Query 79212 TTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAG 79271 || || || ||||| |||| |||| | || ||| ||| | ||| ||||| || Sbjct 111644 CTTGAGTTGTTTCCAATTCCAACGATCGGTTGGAGTGACACCCCACATATCGTATTGGAG 111585 Query 79272 AATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAA 79331 ||||| | ||| || || ||| | ||| | ||| ||||| ||||| | || | Sbjct 111584 TATACCTTGACTTGCTGGAGAACCTTGGAATGATGAATAGGGTCCATCCTTATGAGCGAG 111525 Query 79332 TTCACAACTC--GCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGA 79389 ||| ||| || ||| ||| | | || || || ||| |||||| |||| | | Sbjct 111524 TTCT--ACTGAGGCGCTTAAAGCTGCAAAGTAGATAGTCTCGGAAATCTCAATATTCA-A 111468 Query 79390 TCTTG-TGCTTCTAGGCTATCAAATGGATAATTTAAGAG--AATAAACGCGTCTGCTAAT 79446 | | | ||| || | ||||| || || ||| | || ||| | || || | Sbjct 111467 TTTAGCTGCACCTGTGGATTCAAAAGG-TAGACGAAGGGCTAAGAAAA-CATCAGCAAGA 111410 Query 79447 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATA 79506 ||||||| ||||||||| || ||||| || | || | | | ||||||||| | Sbjct 111409 CCTTGAATACCAATACCAATTGGTCTGTGACGGAGGTTGCTAGTCTTAGCTTCTGGGACT 111350 Query 79507 GGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTA-CTTTG--ACCACA 79563 ||||||||||| |||| ||||| || |||||||| || ||| | ||||| || || Sbjct 111349 GGATAATAATTTCTATCAATAATCTTGTTGAGATTTCTAGTTATAATCTTTGTAACTTCA 111290 Query 79564 T------CCT----------TT---AG--TTTGAGAAAATCAAATCGTCCATC--TATTA 79600 | ||| || || ||| | ||| | || | || | ||| Sbjct 111289 TATAAAGCCTGATGATCAAATTCAAAGGCTTTCTTATAATAAGATTCTGGATTGGTGTTA 111230 Query 79601 CAAACATGT-TCAAC------------GCGACAGATGCCAGATTACAAACGGCTACCTCA 79647 ||| | | |||| || | ||| || || |||||||| || || || Sbjct 111229 GGAACCTCTCTCAAAAACTTTGGTAATGCAATAGAGGCAAGGTTACAAACTGCGACTTCC 111170 Query 79648 TTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAA 79707 | | | | ||||| || || ||||| || | || | |||||| || || Sbjct 111169 TCTGGAGATGTGTATTGAATAATCTCAGTACACAAATTGGATGATGAAATGGTACCCAAG 111110 Query 79708 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTT 79767 || | |||||| || | ||||| ||||| || || ||||| | || ||||||||| Sbjct 111109 TTCTTTTGATTTGATTTCTCATTACAAGCATCTTTGTAGAGAATATAAGGTGTACCAGTT 111050 Query 79768 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTAT 79827 ||||| |||||||| | ||| || ||| | || ||||||| | | ||| | | Sbjct 111049 TCAATTTGAGATTCCACAATAGCAAACCACAAATCTTGAGCCTTAACAA----CTTTTCT 110994 Query 79828 CTCTTTTC-------TCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAAC 79880 || || | ||| |||| ||| | | | ||| || ||||| Sbjct 110993 AGCTAATCCTGGAGTTTGTTCATATTTGAGATAAAGTTTTCTGAATTCCTCTCCATGGCA 110934 Query 79881 ATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTAC 79940 || | | || || || | |||||| | | ||||| ||| ||| | || Sbjct 110933 CTCTGCGAGACCTGGGGCCTCATTAGGACAAAAGAGGGACCAATCTTCATTTCCAGGAAC 110874 Query 79941 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCT 79999 |||| ||||||||||||| ||||||||| || ||| |||| || | | | | || Sbjct 110873 ACGTTCCATAAAGAGATCACAAATCCAAAGGGC-ATAGAATAAGTCACGAGCACGAATCT 110815 Query 80000 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 80059 | || || || ||| || || ||||| | |||| | | | ||||| ||||| || | Sbjct 110814 CTTCCTTACCATGATTTTTCTTTAGATCCAAGAACTCAAAGACATCAGCGTGCCATGGCT 110755 Query 80060 CCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 80119 | ||||||| || | | | || || || ||||| || |||| || | ||| | Sbjct 110754 CTAAGTATACTGCAAAAGCACCTTTTCTCTTACCGCCTCCTTGGTCTACATAACGAGCAG 110695 Query 80120 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 80179 ||| ||| | || | |||||||| | | ||||||||| || || || || || || Sbjct 110694 TGTCGTTAAATACACGTAACATTGGTACTAAACCATTGGAAGTTCCGTTAGTTCCACGGA 110635 Query 80180 TATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAG 80239 ||||| | | |||||||| || || || | ||| ||||| || || |||| Sbjct 110634 TATAGGATTGAGCAGCACGAATCTTGTGAACTGCAATACCAATTCCACCAGCAGATTTAC 110575 Query 80240 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGT 80299 || ||||||||| |||| || ||||| ||||| || || ||| ||| || |||| | Sbjct 110574 TAATCAATGCGCATTGTTTCAAAGTATCGTAGATACCGTCAATGGAATCCTCTTTCATTT 110515 Query 80300 TAAGTAGAAAACAGCTAGACATTTG-GTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 80358 || | ||||| ||||| || | || | || || ||||| || || |||||| Sbjct 110514 GAACCAAGAAACAAGATGACATCTGAGGGAATGGT-GTACCAGCATTGAACAATGTAGGA 110456 Query 80359 GAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATA 80418 | ||| || |||||| | || || || | || ||||||| ||| | | | Sbjct 110455 GTAGCATGAGTAAACAACTTCATGGAGAGCTTTTCATAAGTCTCAAAAGCAGCGTTCAAG 110396 Query 80419 TCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 80478 || | ||| || || | | ||| | ||| ||||| || ||||||||||| || || Sbjct 110395 TCAGTTCCATGTATACCAATAGAGACTCTCATCAACATATGTTGAGGTCTTTCCACAATG 110336 Query 80479 TTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAA 80528 | ||| || ||| || ||| |||||||||| ||||||||||| Sbjct 110335 ATACCATTGATACGTTGCAAATATGATCTTTCCAAAGTCTTAAAACCAAA 110286 >seq36 Length=2033623 Score = 179 bits (198), Expect = 5e-40 Identities = 219/296 (74%), Gaps = 7/296 (2%) Strand=Plus/Minus Query 50255 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 50314 |||| |||||||| ||||||||||| || || || || ||||||||||| || || | | Sbjct 729763 TTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTGGTA 729704 Query 50315 TCTGCACTTCTGTACAAAATC--GTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGC 50372 | || ||||| | |||| ||| |||| ||||||||| || || || || || Sbjct 729703 TTTGAACTTCACTCATAAATTTAGTT--GCTAGATTTTCATTAACAATACCATCTGAAGC 729646 Query 50373 TGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATT--- 50429 ||||||||| || ||||||| || ||||||||||| || ||| ||||| Sbjct 729645 TGCAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTATTTTC 729586 Query 50430 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 50489 ||| ||||||||||| | | || ||| | ||||| ||||||| ||||| || ||||| Sbjct 729585 CCATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCTGC 729526 Query 50490 CTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTAT 50545 | ||||||||||||||| ||||| | |||| ||||| || | ||||||||||| Sbjct 729525 TTGTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATCTAT 729470 Score = 158 bits (174), Expect = 2e-33 Identities = 401/595 (67%), Gaps = 29/595 (5%) Strand=Plus/Minus Query 49669 TTTTGGTATTCACCCACACGTTT---TTCGAAAAAATTAGTTTTTCCTTCCAATGATATA 49725 ||||| |||||| | || ||| ||| ||||| || | ||||| || ||| || || Sbjct 730408 TTTTGATATTCAGCTAC---TTTACCTTCAAAAAAGTTTGATTTTCTTTGCAAAGAAATC 730352 Query 49726 TTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAA 49785 ||||||| |||| || ||||||||| |||| |||| ||||| | || || ||| Sbjct 730351 ATTTCCATCCAATCGAAAGGATTGGTAGAATTAAAAATCTTTTTGTAACC-AAGAGAGAC 730293 Query 49786 ATCAAT-CTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 49844 | | | | ||| ||| ||| || || ||| | ||| | | ||||| || || Sbjct 730292 AACTAGACGATCTGCGCAAAACTCAATGTATTGTGACATGGCTCTGCTGTTCATACCAAT 730233 Query 49845 AAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCA-ATGGATACCGCATCTGTTA 49903 || | |||||| |||| |||| | |||||| | |||| ||| | || |||||| | | Sbjct 730232 GAGATCAACTGGTAGAGATTCAGTTACAAATTCCTTTTCACATGCA-ACAGCATCTTTGA 730174 Query 49904 TAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAA---ACATCAAAC 49960 |||| | ||| | ||| |||| | || | | ||||| | | ||||| Sbjct 730173 TAATGTCTATAATGATTTTTTCATCTAATCTATTTACGA---GTTTACTGTAGAGCAAAC 730117 Query 49961 ATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTC 50020 | || || | || || ||||| || || | |||||| | ||| ||||| || || | | Sbjct 730116 AAGCAAAGTTACAATGTAGACCTTCATCACGACTAATCAATTCATTGGAGAATGTCAAAC 730057 Query 50021 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGA-CGCAAATGACC-CAGAAAAGAA 50078 | ||||||| || | || || |||||||| ||||| | ||| ||| | ||||| | Sbjct 730056 CTGGCATTAAACCTCTTTTCTTTAGCCAAAAGATGGAACAGAAACTACCACTGAAAA--A 729999 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTAT 50138 ||| ||||| || || ||||| || || | ||||||| || | | || || || Sbjct 729998 GATACCTTCAACAGCTGCAAATGCCACCAATCTCTCTGCAAAT---GATCTAGAATTGAT 729942 Query 50139 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT-AA 50197 ||| | ||||| || ||||||||||| ||||| || || |||||||| ||||| || Sbjct 729941 CCATCTCAAGGCCCATTCTGCCTTCTTTTTCACACATGGAATAGTTTCTATAGCATTGAA 729882 Query 50198 AGAGATAGtttttttCATTACT--ATCTTTAACATAAGTATCGATCAAAAGACTA 50250 | ||| ||||| | || | ||||| ||| ||||| || ||||||||| Sbjct 729881 TAATTTAGCTTTTT---GTTCTGGGTTTTTAATATATGTATCAATTAAAAGACTA 729830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268315168560