Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq27 132 4e-26 seq30 109 4e-19 seq38 105 5e-18 seq31 87.8 1e-12 >seq27 Length=1864556 Score = 132 bits (146), Expect = 4e-26 Identities = 157/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 || ||||| | |||||||| || | ||||| | || || |||||||| |||||||| Sbjct 1617468 TCTTTTTGAATGTTGTAATCAGAGAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAG 1617409 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 || |||| |||||||||| || | ||||||||| || || ||||||| | Sbjct 1617408 ATTAATCTTTGTTGATCGGGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTGACATTT 1617349 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| |||||| | | ||||| |||| || |||||||| || |||| |||||| ||| Sbjct 1617348 TCAATGGTGTCGGAACCTTCGACTTCTAAGGTAATAGTTTTACCAGTTAAAGTTTTAACA 1617289 Query 43099 AAAATTTGCATTTTCTTAATTT--TATTTGTA 43128 |||||||||||||| | |||| |||||||| Sbjct 1617288 AAAATTTGCATTTTATATATTTAATATTTGTA 1617257 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 || ||||||| || || ||||| | |||||||| || | ||||| | || || Sbjct 1617942 ACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCT 1617883 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 |||||||| ||||| ||||| | || ||||| |||| || | ||||||||| || || Sbjct 1617882 AATTGTTTACCGGCGAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTGTCT-TG 1617824 Query 43021 A--TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTT 43078 | | | |||| || | ||| |||||| | | || || |||| || || |||| Sbjct 1617823 AATTTTAGCCTTT-ACGTTTTCAATGGTGTCGGAACCTTCTACTTCTAAGGTAATGGTTT 1617765 Query 43079 TTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || || | |||||| |||||||||||||| Sbjct 1617764 TACCAGTCAAAGTTTTAACAAAAATTTGCAT 1617734 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 || ||||||| |||| || ||||| | |||||||| || | ||||| | || || Sbjct 1618170 ACTAAATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGAGAGGGTACGACCATCTTCT 1618111 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 |||||||| |||||||| || |||| ||||| |||| || | ||||||||| || Sbjct 1618110 AATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCGGGTGGAATACCTTCTTTGTCTTGA 1618051 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080 || |||| || | ||| || || | | || || || | || |||||||| Sbjct 1618050 ATTTTGGCTTTTACATTTTCAATGGTATCTGAACCTTCAACTTCAAGGGTAATAGTTTTA 1617991 Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || | || || |||||||||||||| Sbjct 1617990 CCAGTCAAGGTCTTTACAAAAATTTGCAT 1617962 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 ||||| || | |||| || ||||| | || ||||| || ||||| | |||| || Sbjct 1617714 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTATAATCAGATAATGTTCTACCGTCTTCT 1617655 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 |||||||| || || ||||| | || |||||||||| || | ||||||||| || Sbjct 1617654 AATTGTTTACCAGCGAAAATAAGTCTTTGTTGATCGGGTGGAATACCTTCTTTGTCTTGA 1617595 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080 || |||| || | ||| ||||| | | || || || | || || ||||| Sbjct 1617594 ATTTTGGCTTTTACATTTTCAATGGTGTCTGAACCTTCAACTTCAAGGGTAATTGTTTTA 1617535 Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || |||| || || |||||||||||||| Sbjct 1617534 CCAGTTAAGGTCTTTACAAAAATTTGCAT 1617506 >seq30 Length=714265 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||| | || ||||||| || || ||||| | ||||||||| || | ||||| Sbjct 370261 AGTCTGAGTACTAAATGGAGGGTAGATTCTTTTTGGATATTGTAATCAGAGAGAGTACGA 370202 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 |||| ||||||||||| ||||| || || || || |||||||||| || | ||||||| Sbjct 370201 CCGTCTTCCAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCGGGTGGGATACCTTCT 370142 Query 43012 TTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTT 43071 || || ||| | ||||| | | | || || | | ||||| |||| || Sbjct 370141 TTGTCTTGGATTTTGGCCTTGACGTTTTCGATGGTATCTGAACCTTCGACTTCTAAGGTG 370082 Query 43072 ATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || ||||| || |||| |||||| ||||| |||||||| Sbjct 370081 ATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 370044 Score = 95.1 bits (104), Expect = 9e-15 Identities = 162/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||||| || ||||||| ||| || ||||| | |||||| || || | ||||| Sbjct 356309 AGTCTTAGAACTAAATGGAGAGTTGATTCTTTTTGGATATTGTAGTCAGAAAGAGTACGA 356250 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 | || ||||||||||| || |||||||| | || ||||| |||| || | ||||||| Sbjct 356249 CCATCTTCCAATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCGGGTGGGATACCTTCT 356190 Query 43012 TTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTT 43071 || || |||| || || | | | || || | | || || || | || Sbjct 356189 TTATCTTGGATCTTGGTCTTAACATTCTCTATAGTATCAGAACCTTCTACCTCCAAGGTA 356130 Query 43072 ATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCTTAATTTTATTT 43125 || ||||| || || | |||||| ||||||||||||| || ||| || ||||| Sbjct 356129 ATTGTTTTACCTGTCAAAGTTTTAACAAAAATTTGCA--TTATTATTTGTATTT 356078 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||| | || ||||||| ||| |||||||| | |||||| || || | ||||| Sbjct 356538 AGTCTGAGAACTAAATGGAGAGTTGATTCCTTTTGAATATTGTAGTCAGAGAGAGTACGA 356479 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 | || ||||||||||| || |||||||| | || |||||||||| || | ||||||| Sbjct 356478 CCATCTTCCAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCGGGTGGGATACCTTCT 356419 Query 43012 TTTTC 43016 || || Sbjct 356418 TTATC 356414 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||| | || ||||||| ||| || ||||| | |||||| || || || ||||| Sbjct 356766 AGTCTGAGTACTAAATGGAGAGTAGATTCTTTTTGGATATTGTAGTCAGATAAAGTACGA 356707 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 | || ||||||||||| || |||||||| | || ||||| |||| || | ||||||| Sbjct 356706 CCATCTTCCAATTGTTTACCAGCAAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTCT 356647 Query 43012 TTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTT 43071 || || ||| || || | ||| || || | || || || | || Sbjct 356646 TTATCTTGAATCTTGGTCTTAACATTCTCAATAGTATCTGATCCTTCAACTTCCAAGGTA 356587 Query 43072 ATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || ||||| || || ||||| || ||||| |||||||| Sbjct 356586 ATGGTTTTACCTGTAAGAGTCTTTACAAAGATTTGCAT 356549 >seq38 Length=878590 Score = 105 bits (116), Expect = 5e-18 Identities = 156/220 (71%), Gaps = 1/220 (0%) Strand=Plus/Minus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||| | |||||||||| || || ||||| | ||||||||||| | ||||| Sbjct 148401 AGTCTGAGTACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCGGAGAGAGTACGA 148342 Query 42952 TCGTCGTCCAATTGTTTGCCG-GCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTC 43010 | || || |||||||| ||| || ||||| | || |||||||||| || | |||||| Sbjct 148341 CCATCTTCTAATTGTTTACCGAGCGAAAATGAGTCTTTGTTGATCGGGTGGGATACCTTC 148282 Query 43011 TTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGT 43070 ||| || ||| ||||||| | | | |||||| | | || || |||| || Sbjct 148281 TTTATCTTGGATTTTGGCTTTGACATTTTCGATGGTGTCGGAACCTTCAACTTCTAGGGT 148222 Query 43071 TATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || ||||| || |||| ||||| ||||| ||||||||| Sbjct 148221 AATGGTTTTACCAGTTAATGTTTTAACAAAGATTTGCATT 148182 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 ||||| | ||||| | |||||||||| ||| || ||||| | |||||||| || Sbjct 148638 CCTCCTCTGAGTCTGAGTACCAAATGGAGAGTTGATTCTTTTTGGATGTTGTAATCAGAG 148579 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || |||||||| |||||||| || || || ||||| |||| || Sbjct 148578 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGGTCGGGTGGG 148519 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| ||||||| | | | || || | | || || Sbjct 148518 ATACCTTCTTTATCTTGGATTTTAGCTTTGACATTTTCGATGGTATCAGAACCTTCAACT 148459 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || || || | || || |||||||||||||| Sbjct 148458 TCAAGGGTAATGGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCAT 148412 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||| | |||||||||| || || ||||| | |||||||| || | ||||| Sbjct 148857 AGTCTGAGTACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGA 148798 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 | || || |||||||| ||||| ||||| | || ||||| |||| || | ||||||| Sbjct 148797 CCATCTTCTAATTGTTTACCGGCGAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTCT 148738 Query 43012 TTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTT 43071 || || ||| | || || | ||| |||||| | | || || || | || Sbjct 148737 TTGTCTTGAATCTTAGCCTTTACGTTTTCAATGGTGTCGGAACCTTCAACTTCAAGGGTA 148678 Query 43072 ATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || || |||| || || |||||||||||||| Sbjct 148677 ATGGTCTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 148640 >seq31 Length=145395 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||| | || ||||||| ||| || ||||| | ||| || || || | ||||| Sbjct 8278 AGTCTGAGAACTAAATGGAGAGTTGATTCTTTTTGTATATTATAGTCAGAGAGAGTACGA 8337 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 | || ||||||||||| || |||||||| | || ||||| |||| || | ||||||| Sbjct 8338 CCATCTTCCAATTGTTTACCAGCAAAAATAAGTCTTTGTTGGTCGGGTGGAATACCTTCT 8397 Query 43012 TTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTT 43071 || || |||| ||| || | ||| ||||| | | || || |||| || Sbjct 8398 TTATCTTGGATCTTGGTTTTAACATTCTCAATGGTGTCAGAACCTTCAACTTCTAAGGTA 8457 Query 43072 ATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || || || | ||||| ||||| |||||||| Sbjct 8458 ATTGTCTTACCAGTCAATGTTTTGACAAAGATTTGCAT 8495 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||| | || ||||||| ||| |||||||| | || || || || || ||||| Sbjct 8049 AGTCTGAGAACTAAATGGAGAGTTGATTCCTTTTGTATGTTATAGTCAGATAAGGTACGA 8108 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 | || ||||||||||| || |||||||| | || |||||||||| || | ||||||| Sbjct 8109 CCATCTTCCAATTGTTTACCAGCAAAAATGAGACGTTGTTGATCGGGTGGAATACCTTCT 8168 Query 43012 TTTTC 43016 || || Sbjct 8169 TTATC 8173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369349011132