Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04]
54 sequences; 23,375,662 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq33 199 5e-46
seq36 176 6e-39
>seq33
Length=884058
Score = 199 bits (220), Expect = 5e-46
Identities = 605/923 (66%), Gaps = 9/923 (1%)
Strand=Plus/Minus
Query 71695 AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATT 71754
|| |||| ||| || || |||||||| || || || | | | | ||||| |||||
Sbjct 111205 AATGCAATAGAGGCAAGGTTACAAACTGCGACTTCCTCTGGAGATGTGTATTGAATAATC 111146
Query 71755 TCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA 71814
||||| || | ||| | ||||| || || || | |||||| || | |||
Sbjct 111145 TCAGTACACAAATTGGATGATGAAATGGTACCCAAGTTCTTTTGATTTGATTTCTCATTA 111086
Query 71815 CACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCT 71874
|| ||||| || || |||||| | || |||||||||||||| |||||||| | ||| ||
Sbjct 111085 CAAGCATCTTTGTAGAGAATATAAGGTGTACCAGTTTCAATTTGAGATTCCACAATAGCA 111026
Query 71875 TTCCAGACGACTCGAGCCTTTATTA-TATTCTTG-TATCTCTTTTCTCT-TTCGTATTGT 71931
||| | || ||||||| | | | |||| | || || | | ||| ||||
Sbjct 111025 AACCACAAATCTTGAGCCTTAACAACTTTTCTAGCTAATCCTGGAGTTTGTTCATATTTG 110966
Query 71932 GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGT-CTAATCCAGGACATTCATTCGG 71990
||| | | | ||| || ||||| ||| | | | | || || ||||| ||
Sbjct 110965 AGATAAAGTTTTCTGAATTCCTCTCCATG-GCACTCTGCGAGACCTGGGGCCTCATTAGG 110907
Query 71991 ACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCA 72050
||| | | ||||| ||| ||| || || |||| ||||||||||||| ||||||
Sbjct 110906 ACAAAAGAGGGACCAATCTTCATTTCCAGGAACACGTTCCATAAAGAGATCACAAATCCA 110847
Query 72051 AAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGAT 72109
||| || ||| |||| || | | | | ||| || || || ||| || || ||||
Sbjct 110846 AAGGGC-ATAGAATAAGTCACGAGCACGAATCTCTTCCTTACCATGATTTTTCTTTAGAT 110788
Query 72110 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCC 72169
| | |||| | | | ||||| ||||| || || ||||||| || | | | || |
Sbjct 110787 CCAAGAACTCAAAGACATCAGCGTGCCATGGCTCTAAGTATACTGCAAAAGCACCTTTTC 110728
Query 72170 GTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 72229
|| ||||| || |||| || | ||| |||| ||| | || | |||||||| |
Sbjct 110727 TCTTACCGCCTCCTTGGTCTACATAACGAGCAGTGTCGTTAAATACACGTAACATTGGTA 110668
Query 72230 TAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGC 72289
| ||||||||| | || || || || ||||||| | | |||||||| |||
Sbjct 110667 CTAAACCATTGGAAGTTCCGTTAGTTCCACGGATATAGGATTGAGCAGCACGAATCTTGT 110608
Query 72290 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 72349
|| || | ||| ||||| || || |||| || ||||||||| |||| || ||||
Sbjct 110607 GAACTGCAATACCAATTCCACCAGCAGATTTACTAATCAATGCGCATTGTTTCAAAGTAT 110548
Query 72350 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG-G 72408
| ||||| || || || ||| || |||| | || | ||||| ||||| || |
Sbjct 110547 CGTAGATACCGTCAATGGAATCCTCTTTCATTTGAACCAAGAAACAAGATGACATCTGAG 110488
Query 72409 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 72468
|| | || || ||||| || || ||||||| ||| || |||||| | || ||
Sbjct 110487 GGAATGGT-GTACCAGCATTGAACAATGTAGGAGTAGCATGAGTAAACAACTTCATGGAG 110429
Query 72469 AGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACA 72528
|| | || ||||||| ||| | | | || | |||||| || | | |||
Sbjct 110428 AGCTTTTCATAAGTCTCAAAAGCAGCGTTCAAGTCAGTTCCATGTATACCAATAGAGACT 110369
Query 72529 CGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGAT 72588
| ||| |||||||| ||||||||||| || || | ||| || ||| || |||
Sbjct 110368 CTCATCAACATATGTTGAGGTCTTTCCACAATGATACCATTGATACGTTGCAAATATGAT 110309
Query 72589 TTTTCCAAAGTTTTAAAACCAAA 72611
|||||||||| |||||||||||
Sbjct 110308 CTTTCCAAAGTCTTAAAACCAAA 110286
>seq36
Length=2033623
Score = 176 bits (194), Expect = 6e-39
Identities = 218/296 (74%), Gaps = 7/296 (2%)
Strand=Plus/Minus
Query 42360 TTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAA 42419
|||| |||||||| ||||||||||| || || || || |||||||||||||| || | |
Sbjct 729763 TTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTGGTA 729704
Query 42420 CCTGTACTTCTGTACAAAATC--GTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGC 42477
|| ||||| | |||| ||| |||| |||||| || || || || || ||
Sbjct 729703 TTTGAACTTCACTCATAAATTTAGTT--GCTAGATTTTCATTAACAATACCATCTGAAGC 729646
Query 42478 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATT--- 42534
||||||||| || ||||||| || |||| |||||| | |||| |||||
Sbjct 729645 TGCAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTATTTTC 729586
Query 42535 CCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGC 42594
||| ||||||||||| | | || ||| | |||||| | ||||| ||||| ||||||||
Sbjct 729585 CCATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCTGC 729526
Query 42595 CTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTAT 42650
| ||||||||||||||| || || | |||| |||||| || | |||||||||||
Sbjct 729525 TTGTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATCTAT 729470
Score = 140 bits (154), Expect = 4e-28
Identities = 397/595 (67%), Gaps = 29/595 (5%)
Strand=Plus/Minus
Query 41774 TTTTGGTATTCACCCACACGTTT---TTCGAAAAAATTAGTCTTTCCTTCCAATGATATA 41830
||||| |||||| | || ||| ||| ||||| || | |||| || ||| || ||
Sbjct 730408 TTTTGATATTCAGCTAC---TTTACCTTCAAAAAAGTTTGATTTTCTTTGCAAAGAAATC 730352
Query 41831 TTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAA 41890
||||||| |||| || ||||||||| |||| |||| ||||| | || || |||
Sbjct 730351 ATTTCCATCCAATCGAAAGGATTGGTAGAATTAAAAATCTTTTTGTAACC-AAGAGAGAC 730293
Query 41891 ATCAAT-CTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 41949
| | | | ||||||| || || || ||| | ||| | | ||||| || ||
Sbjct 730292 AACTAGACGATCTGCGCAAAACTCAATGTATTGTGACATGGCTCTGCTGTTCATACCAAT 730233
Query 41950 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 42009
|| | |||||| |||| |||| | |||||| | |||| | || || ||| | ||
Sbjct 730232 GAGATCAACTGGTAGAGATTCAGTTACAAATTCCTTTTCACATGCAACAGCATCTTTGAT 730173
Query 42010 AATAGATCT-TACTG-TTTCTTCACTCGGTGGATACAATAAATGTTTAA---ACATCAAA 42064
||| ||| || || ||| |||| | || | | ||||| | | ||||
Sbjct 730172 AATG--TCTATAATGATTTTTTCATCTAATCTATTTACGA---GTTTACTGTAGAGCAAA 730118
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| || || | || || ||||| ||||| | |||||| ||||| ||||| || || |
Sbjct 730117 CAAGCAAAGTTACAATGTAGACCTTCATCACGACTAATCAATTCATTGGAGAATGTCAAA 730058
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGA-CGCAAATGATCCAGAAAAGAA 42183
|| ||||||| || | || || |||||||| || || | ||| | ||| || ||
Sbjct 730057 CCTGGCATTAAACCTCTTTTCTTTAGCCAAAAGATGGAACAGAAACTA-CCACTGAAAAA 729999
Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGTAT 42243
||| ||||| || || ||||| || | | ||||||| || | | || || ||
Sbjct 729998 GATACCTTCAACAGCTGCAAATGCCACCAATCTCTCTGCAAAT---GATCTAGAATTGAT 729942
Query 42244 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT-AA 42302
||| | ||||| || ||||||||||| ||||| || || |||||||| ||||| ||
Sbjct 729941 CCATCTCAAGGCCCATTCTGCCTTCTTTTTCACACATGGAATAGTTTCTATAGCATTGAA 729882
Query 42303 AGAGATAGtttttttCATTACT--ATCTTTAACATATGTATCGATCAAAAGACTA 42355
| ||| ||||| | || | ||||| ||||||||| || |||||||||
Sbjct 729881 TAATTTAGCTTTTT---GTTCTGGGTTTTTAATATATGTATCAATTAAAAGACTA 729830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138746981040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |