Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq27 95.1 1e-14 >seq27 Length=1864556 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| || || | |||| ||| | || || || |||||||| || ||||| | Sbjct 1617732 CCACCTCTTAATCTGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTATAATCAGAT 1617673 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | |||| | |||| || | |||||||| || |||||||||| || ||||| || Sbjct 1617672 AATGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATAAGTCTTTGTTGATCGGGTGGA 1617613 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || |||||||| |||||| |||||| | | | || || | || | Sbjct 1617612 ATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTGTCTGAACCTTCAACT 1617553 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | |||||| |||||||| ||||| || || |||||||||||||| Sbjct 1617552 TCAAGGGTAATTGTTTTACCAGTTAAGGTCTTTACAAAAATTTGCAT 1617506 Score = 91.5 bits (100), Expect = 1e-13 Identities = 166/242 (69%), Gaps = 1/242 (0%) Strand=Plus/Plus Query 18801 TATTTTATTGTTTT-CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGA 18859 ||||||||| || || |||| || || | |||| ||| | || || || |||||| Sbjct 1695696 TATTTTATTTAATTACCACCTCTTAATCTGAGAACCAAGTGAAGAGTGGATTCTTTTTGA 1695755 Query 18860 ATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTC 18919 || || || || | | ||| | | || || | |||||||| ||| |||||||||| Sbjct 1695756 ATGTTATAGTCGGATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTT 1695815 Query 18920 TGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTA 18979 || || || || | || ||||| || |||||| |||||| | | | |||| Sbjct 1695816 TGTTGGTCGGGTGGGATACCTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATAGTA 1695875 Query 18980 TCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGC 19039 || | || ||| | |||||| |||||||| ||||| || || |||||||||||| Sbjct 1695876 TCTGAACCTTCAACTTCAAGGGTAATTGTTTTACCAGTTAAGGTCTTAACAAAAATTTGC 1695935 Query 19040 AT 19041 || Sbjct 1695936 AT 1695937 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898 || || || || || |||||||| |||||||| | | || | || || | ||| Sbjct 1617480 TGTAATGTTGATTCTTTTTGAATGTTGTAATCAGAGAGAGTACGACCATCTTCTAATTGT 1617421 Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958 ||||| ||| | || | ||| || ||||| || | || ||||| || |||||| Sbjct 1617420 TTACCGGCAAAGATTAATCTTTGTTGATCGGGTGGAATACCTTCTTTATCTTGAATTTTG 1617361 Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTT 19018 ||| || | | | || ||| | || ||| | |||||| |||||||| ||| Sbjct 1617360 GCTTTGACATTTTCAATGGTGTCGGAACCTTCGACTTCTAAGGTAATAGTTTTACCAGTT 1617301 Query 19019 AAAGTTTTGACAAAAATTTGCATTTTAAATCTCTTATA 19056 |||||||| |||||||||||||||||| || | | ||| Sbjct 1617300 AAAGTTTTAACAAAAATTTGCATTTTATATATTTAATA 1617263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572527159276