Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq27 91.5 9e-14 >seq27 Length=1864556 Score = 91.5 bits (100), Expect = 9e-14 Identities = 168/245 (69%), Gaps = 1/245 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| | | || ||||| ||||| || |||||||| || ||||||||||| Sbjct 1617505 ACCACCTCTTAATCTGAGTACTAAATGTAATGTTGATTCTTTTTGAATGTTGTAATCAGA 1617446 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | | || || ||||| || || ||| ||||| | ||| || || | || Sbjct 1617445 GAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGATCGGGTGG 1617386 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || ||| ||| || ||| ||| |||||| || || Sbjct 1617385 AATACCTTCTTTATCTTGAATTTTGGCTTTGACATTTTCAATGGTGTCGGAACCTTCGAC 1617326 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT-TATGGTTA 33380 || | || || ||||| || || | |||||| || ||||||||||| || ||| ||| Sbjct 1617325 TTCTAAGGTAATAGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCATTTTATATATTTA 1617266 Query 33381 ATGTT 33385 || || Sbjct 1617265 ATATT 1617261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777390204492