Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq36 129 5e-25 >seq36 Length=2033623 Score = 129 bits (142), Expect = 5e-25 Identities = 625/984 (64%), Gaps = 99/984 (10%) Strand=Plus/Minus Query 12860 TTTTGATATTC-GCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918 ||||||||||| |||| || | |||||||||||||| ||||| || || ||||| | Sbjct 730408 TTTTGATATTCAGCTA-CTTTACCTTCAAAAAAGTTTGATTTTCTTTGCAAAGAAATCAT 730350 Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACACCCTA---ATTCTAG 12975 |||||| ||||||||||||| | ||| | | ||||| | || | | | | Sbjct 730349 TTCCATCCAATCGAAAGGATTGGTAGAATTAAAAATCTTTTTGTAACCAAGAGAGACAAC 730290 Query 12976 TA-ACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTA 13034 || || ||||| |||| ||||| ||||| ||| ||| | |||||| || | Sbjct 730289 TAGACGATCTGC--GCAA--AACTCAATGTATTGTGACATGGCTCTGCTGTTCATACCAA 730234 Query 13035 TTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATAT-CAACTGCTTCGATA 13093 | | | || || | || ||| |||| ||| | ||||| | || |||| || || | Sbjct 730233 TGAGATCAACTGGTAGAGATTCAGTTACAAATTCCTTTTC-ACATGCAACAGCATCTTTG 730175 Query 13094 ACTATGTCTCTTATTACGTTCTC---TAATGGAGGATTTGATAGATGCTTAAACATCATA 13150 | |||||| | || | || || |||| | ||| || | | | | || | Sbjct 730174 ATAATGTCTATAATGATTTTTTCATCTAATCTA---TTTACGAGTTTACTGTAGAGCAAA 730118 Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 || ||||| | ||| || | |||||||| | ||| || | || || || ||||| | | Sbjct 730117 CAAGCAAAGTTACAATGTAGACCTTCATCACGACTAATCAATTCATTGGAGAATGTCAAA 730058 Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAG--CAGCAAACGAACCC-Gaaaaa 13267 || ||||| | |||| ||| || | |||||| || | ||| |||| | | | |||||| Sbjct 730057 CCTGGCATTAAACCTCTTTTCTTTAGCCAAAAGATGGAACAG-AAACTACCACTGAAAAA 729999 Query 13268 aaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC 13327 ||| |||||||| |||||||| || | ||| || || || | | ||| || || Sbjct 729998 GATA--CCTTCAACAGCTGCAAATGCCACCAATCTCTCTGCAAATGATCTAGAATTGATC 729941 Query 13328 TCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCG 13387 | || | |||||| | ||| || | ||| || || ||| ||||||| || Sbjct 729940 CATCTCAA------GGCCCATTCTGCCTTCTTTTTCACACATGGAATAGTTTCTATAGCA 729887 Query 13388 TTAAATAAATAA---tttttttCC------TTACTGT-----------------CTAAAA 13421 || ||||| | | |||| ||| ||| | | |||||| Sbjct 729886 TTGAATAATTTAGCTTTTTGTTCTGGGTTTTTAATATATGTATCAATTAAAAGACTAAAA 729827 Query 13422 TATAA----GT-----ATCT---------ATCAATAAG------------------CTAT 13445 || || || |||| |||||||| || | Sbjct 729826 TACAATAATGTTAATCATCTTGAATTTGAATCAATAATTGGTTTAAATTTCCTTACCTGT 729767 Query 13446 ACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTG 13505 | |||| |||||||||||||| || || |||||||||||||| |||||||| || |||| Sbjct 729766 AAGTTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTG 729707 Query 13506 ATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAG 13565 || |||||||| |||| | ||||| ||||| ||||| || || || || Sbjct 729706 GTATTTGAACTTCACTCATAAATTTAGTTGCTAGATTTTCATTAACAATACCATCTGAAG 729647 Query 13566 CAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTC---TGACAACTTTA 13622 | |||||||| || | || | ||| || | |||||| ||||| | || ||| Sbjct 729646 CTGCAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTATTTT 729587 Query 13623 ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAG 13682 ||| || | ||| | | |||||| | ||| || | ||||| || || || | | Sbjct 729586 CCCATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCTG 729527 Query 13683 CCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAACACAACGTATCT-TCCA 13741 | | |||||||| ||||||| || || ||| ||||| | ||| |||| ||| Sbjct 729526 CTTGTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATCTATCC- 729468 Query 13742 GTTG-TCTGTCTTAAAATCGGTTC 13764 ||| ||| | ||||||| ||||| Sbjct 729467 -TTGTTCTCTTTTAAAATTGGTTC 729445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982116359708