Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq34 141 1e-28 >seq34 Length=1536112 Score = 141 bits (156), Expect = 1e-28 Identities = 394/593 (66%), Gaps = 25/593 (4%) Strand=Plus/Minus Query 164381 ATGTTCAAT-TAAATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTT 164439 |||||||| | ||||| |||||||| | ||||| | ||||| | ||| ||||||| Sbjct 841957 ATGTTCAAAATTGATTGGGATTTTGAAAATATGGGTATTGGTGGTTTGGATGCAGAATTT 841898 Query 164440 TCTCTTATTTTCAGACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAA-TAATaaaaaa 164498 |||||||||| |||| ||||| ||||| ||||| | | | | || | ||| Sbjct 841897 AGAGATATTTTCAGAAGAGCTTTTGCCAGTAGATT-GTTCCCACCTTCACTTATTACAAA 841839 Query 164499 aTTAGGCTGTAAAC-ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAA 164557 || || ||||||| || | | ||| || |||| ||||||| || ||| ||||| | Sbjct 841838 GTTGGG-TGTAAACCATGTTAGAGGTATGCTATTGTATGGACCACCAGGTACTGGTAAGA 841780 Query 164558 CATTAATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTA 164614 || | || || || |||| | ||| | | ||| || || || |||| | ||| Sbjct 841779 CACTCATTGCCAGACAGATTGGT-AAGATGCTTAATGGTCGTGAACC--TAAACTCGTTT 841723 Query 164615 ATGGTCC-TGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTG 164673 ||||| | |||| ||| | ||||||||||||| || ||| ||||| |||| | | Sbjct 841722 CAGGTCCATCAATT-TTGGATAAATATGTAGGTGGTTCTGAAAACAATGTAAGAATGCTC 841664 Query 164674 TTTCAGGAGGCTGAAGAAGAACAAAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTATT 164733 ||| || |||||| ||||| ||| || ||| | | ||||||| | || Sbjct 841663 TTTAGAGAAGCTGAAATTGAACAGAAGCAAAAGGGTGAAAATTCAGGATTACATATCATC 841604 Query 164734 GTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGGT----GATAATATTATTC---- 164785 || |||||||| | ||||| ||||||| | | ||| || || | | || Sbjct 841603 ATTCTTGATGAGTTGGATGCCATTTGCAAGACTAGAGGTACCAGACAAGGTGACTCTGGT 841544 Query 164786 ----ATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAAT 164841 |||| | || || ||||| | || | | || |||||||| ||||| | ||| Sbjct 841543 GTAGGTGATTCTGTAGTCAATCAACTTCTAGCAATGATTGATGGTGTGGAATCTCTCAAT 841484 Query 164842 AATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGA 164901 ||||| ||| | | |||||||| || || || | |||||||||||| | || || Sbjct 841483 AATATCTTAGTCATTGGTATGACTAATAGAAAAGAAATGATTGATGATGCTCTTTTGAGA 841424 Query 164902 CCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACG 164954 |||||||| || || | | ||||||| |||||| || |||| || || Sbjct 841423 CCTGGTCGTTTGGAGGTTCATGTAGAAATCTCATTACCTAACGAAGAGGGTCG 841371 Score = 86.0 bits (94), Expect = 7e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 19362 AAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATTTATC 19421 |||| |||||||| ||| | || || ||| ||||| || ||||||||| |||| Sbjct 559012 AAATTGGTGATAAATTTTCATCAAGACATGGTCAGAAAGGTACTTGTGGTATGGCATATC 558953 Query 19422 GTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAACCCAC 19481 ||||||||||| | || ||||| || ||| | || || ||| | ||| | || |||| Sbjct 558952 GTCAAGAAGATCTTCCATTTACAGTTGAAGGTGTTGTACCAGATATCATTGTAAATCCAC 558893 Query 19482 ATGCTTTTCCAAGTCGAATGAC 19503 ||||| ||||| ||| ||||| Sbjct 558892 ATGCTATTCCATCTCGTATGAC 558871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871597786400