Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq46 176 7e-39 seq19 91.5 2e-13 >seq46 Length=277422 Score = 176 bits (194), Expect = 7e-39 Identities = 496/759 (65%), Gaps = 31/759 (4%) Strand=Plus/Plus Query 193436 AGCATTAATAACAGGCATAACTGGGCAGGATGGATCTTATCTTGCCGAGTTTCTTTTGTC 193495 ||||||||| |||| || ||||| || |||||||| ||| | | || ||||| || Sbjct 47705 AGCATTAATTTCAGGTATTACTGGACAAGATGGATCATATTTAACAGAATTTCTATTAGA 47764 Query 193496 TAAGGGATATGAAGTTCATGGTATTGTAAGGAGAAGTTCCCTAATCAATACTCATAGAAT 193555 || |||||| |||||||||||||| | || ||| || | | |||||| |||||| Sbjct 47765 AAAAGGATATCAAGTTCATGGTATTATTAGAAGATCATCATCATTTAATACTAGTAGAAT 47824 Query 193556 TGATCATATCTATGAG---------------------AAGATCACTCTTCATTATGGAGA 193594 ||| ||| | ||| | || || | | || ||||| || Sbjct 47825 TGAACATTTATATCATGACAGACATACAGGTAAAGGAAAAATGATATTACACTATGGTGA 47884 Query 193595 TCTAACTGATCCTGTAAATGTTATGGGTGTCATTAGGGCAGTTGAACCTGCTGAGATCTA 193654 | |||| || | ||| | | ||| ||||| ||| | || ||||||| || Sbjct 47885 TTTAACAGACTCCACCAATTTAGTAGGTATCATTTCCAAAGTGAACCCAACTGAGATTTA 47944 Query 193655 TAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTATACTTCTAA 193714 |||||| || || || |||||||||||| ||||| ||| || || || | || Sbjct 47945 TAATCTCGGAGCACAGTCTCATGTTAAAGTCAGTTTTGATATGAGTGAATACACAGCCAA 48004 Query 193715 TGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGT--ATGTTGGGAATGGAG 193772 ||| || | | | || | | | || || || || ||||| |||| | | | || Sbjct 48005 TGTAGACGGTCTTGGTTGTTTACGTATTCTCGATGCCATTCGTTCATGTGGTTTA-GAAG 48063 Query 193773 AAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACT 193832 | | | ||| ||||||| || |||||| ||||| ||||| || | || | | Sbjct 48064 ATAAA-GTTAAATTCTATCAAGCCTCTACCTCAGAACTCTATGGAAAGGTACAAGAGATT 48122 Query 193833 CCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTAT 193892 || | ||| ||||||||||| ||| | ||||| || || |||| || || || | | Sbjct 48123 CCTCAATCTGAAACCACACCTTTTTACCCACGTTCCCCCTATGCAGTTGCCAAACAATTT 48182 Query 193893 GGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATT 193952 | |||||||| | || || | ||| | ||| | |||| || ||||| Sbjct 48183 GCCTATTGGATTGTTGTAAACTACAGAGAGGCTTATAACATGTACGCATGTAACGGTATA 48242 Query 193953 CTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAA 194012 | ||||| ||||| || |||||||||||| || ||||||||| | || || ||| | Sbjct 48243 TTATTCAACCACGAGTCACCAAGAAGAGGTCCAACCTTTGTAACTAGAAAAAT--CACTA 48300 Query 194013 GGTTTAT--CTAAGATCTCTGTTGGAT-TACAGAAGATTCTTTATCTTGGTAATCTTAAT 194069 | ||| | |||| | || ||| | || ||| | ||| ||| | ||||| | ||| Sbjct 48301 GATTTGTTGCTAAAGTTGCTACTGGTTCTAAAGAT-ACTCTCTATTTGGGTAACATCAAT 48359 Query 194070 GCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAA 194129 || | | |||||||| || || | || ||||| || || |||||||||||||| ||| Sbjct 48360 GCACAACGTGATTGGGGTCATGCTAGAGACTATGTAGAGGCAATGTGGTTAATGTTACAA 48419 Query 194130 CAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168 || || |||| | || | ||| ||||| || |||||| Sbjct 48420 CAAGAAAAACCACAAGACTTTGTCATTGCAACTGGTGAA 48458 >seq19 Length=705216 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/159 (74%), Gaps = 8/159 (5%) Strand=Plus/Plus Query 144946 GAACCTATTTTAGTATCTGGAACTGATGGTGTAGGAACTAAAATTGATATTGCACAAGCC 145005 || || ||||| |||||||| |||||||||||||| || ||| | | ||||||| || Sbjct 477709 GATCCAATTTTGGTATCTGGTACTGATGGTGTAGGTACAAAACTAAAGATTGCAC-AGGA 477767 Query 145006 GCTAATGACTATACA----ACTATTGGTATAGATCTTGTTGCCATGTGTGTGAATGATAT 145061 || ||| |||||| ||||||||||| ||| | ||||| |||||||| |||||| | Sbjct 477768 ACT--TGA-TATACATGGCACTATTGGTATTGATTTGGTTGCAATGTGTGTAAATGATGT 477824 Query 145062 AATAACCTGTGGTGCGAAACCATTATACTTCTTAGATTA 145100 | || ||||| ||||||| | ||| |||| || Sbjct 477825 AGTAGTTCAAGGTGCTGAACCATTGTTTTTCCTAGACTA 477863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807554654900240