Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq36 104 2e-17 seq27 86.0 7e-12 >seq36 Length=2033623 Score = 104 bits (114), Expect = 2e-17 Identities = 203/294 (69%), Gaps = 7/294 (2%) Strand=Plus/Minus Query 21774 TTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAAC 21833 |||||||||| |||||||| || || || || || || || |||||||| || |||| Sbjct 729763 TTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTGGTA 729704 Query 21834 ATTGAACCTCGGA-ATAAAATC-GTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGC 21891 |||||| || ||||| | |||| | | |||||||| || || ||||| || Sbjct 729703 TTTGAACTTCACTCATAAATTTAGTTG--CTAGATTTTCATTAACAATACCATCTGAAGC 729646 Query 21892 GGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAA--TTTTTTC 21949 ||||||||||| |||| ||| || |||| | ||| || || |||| | ||||| Sbjct 729645 TGCAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTATTTTC 729586 Query 21950 CAATCTAAT-AAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGC 22008 | || | | | ||| | | |||||| | ||||| | |||||| || || || Sbjct 729585 CCATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCTGC 729526 Query 22009 CTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCT 22062 | |||||||||| |||| || || ||| | |||||||||| ||||| || Sbjct 729525 TTGTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATCT 729472 >seq27 Length=1864556 Score = 86.0 bits (94), Expect = 7e-12 Identities = 198/297 (67%), Gaps = 6/297 (2%) Strand=Plus/Minus Query 65584 GATGTTATTGGTATAGATGAGGGACAGTTTTTTCCAGATATTGTTAATTTTTCGGAATCT 65643 ||||| ||||| || || || || |||||||| |||||| |||| |||| || | Sbjct 792287 GATGTAATTGGCATTGACGAAGGTCAGTTTTTCCCAGATGTTGTGGATTTCAGTGAGGAT 792228 Query 65644 ATGGCAAATATTGGTAAAATTGTTATTATCGCCGCCTTAGACGGTACTTATAAAAGAAGT 65703 | || |||| ||||||||||| || || || || |||| || || | | |||||| Sbjct 792227 CTTGCCAATAAAGGTAAAATTGTAATCATTGCAGCTCTAGATGGAACATTTCAAAGAAAA 792168 Query 65704 CCGTTTAATGATATTTTACAACTTATACCATTATCAGAGAAAGTTATAAAACTAAATGCG 65763 || || |||||| | || || | ||||| | ||| ||||| | ||| Sbjct 792167 CCATTCCCAACCATTTTAAATCTCATTGGTAAAGCAGAGGATATTACCAAACTGACTGCA 792108 Query 65764 GTATGTATGAATTGTTATGGAGACGCATCTTTTTCAAAAAGAA---TTAGTGACGAAAAA 65820 || |||||| ||||| | || || | || |||||||||| || ||| ||| Sbjct 792107 GTTTGTATGGTTTGTTTTAATGATGCTGCATTCTCAAAAAGAACCGTTTCTGATGAATCT 792048 Query 65821 GAAATAGAGATTATAGGAGGAAGTGAAAAATATAAATCCGTATGTAGAAAATGTTAT 65877 | |||| | || || || | ||| ||||||| || || ||||||| |||||| Sbjct 792047 G---TAGAATTGATTGGTGGTACTGATAAATATATTTCAGTTTGTAGAAGTTGTTAT 791994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900440966960