Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq36 161 1e-34 seq33 138 1e-27 >seq36 Length=2033623 Score = 161 bits (178), Expect = 1e-34 Identities = 215/296 (73%), Gaps = 7/296 (2%) Strand=Plus/Minus Query 33599 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33658 |||| |||||||| ||||||||||| || || || || ||||||||||| || || | | Sbjct 729763 TTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTGGTA 729704 Query 33659 TCTGTACTTCTGTACAAAATC--GTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGC 33716 | || ||||| | |||| ||| || | ||||||||| || || || || || Sbjct 729703 TTTGAACTTCACTCATAAATTTAGTT--GCTAGATTTTCATTAACAATACCATCTGAAGC 729646 Query 33717 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT--- 33773 ||||||||| || ||||||| || |||| |||||| | | ||| ||||| Sbjct 729645 TGCAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTATTTTC 729586 Query 33774 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33833 ||| ||||||||||| | | || ||| | ||||| ||||||| ||||| || ||||| Sbjct 729585 CCATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCTGC 729526 Query 33834 CTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCTAT 33889 | ||||||||| ||||| ||||| |||| ||||| || | ||||||||||| Sbjct 729525 TTGTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATCTAT 729470 Score = 150 bits (166), Expect = 2e-31 Identities = 396/593 (67%), Gaps = 25/593 (4%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTT---TTCGAAAAAATTAGTTTTTCCTTCCAATGATATA 33069 ||||| |||||| | || ||| ||| ||||| || | ||||| || ||| || || Sbjct 730408 TTTTGATATTCAGCTAC---TTTACCTTCAAAAAAGTTTGATTTTCTTTGCAAAGAAATC 730352 Query 33070 TTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAA 33129 ||||||| |||| || ||||||||| |||| |||| ||||| | || || ||| Sbjct 730351 ATTTCCATCCAATCGAAAGGATTGGTAGAATTAAAAATCTTTTTGTAACC-AAGAGAGAC 730293 Query 33130 ATCAAT-CTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 33188 | | | | ||| ||| || || || ||| | ||| | | ||||| || || Sbjct 730292 AACTAGACGATCTGCGCAAAACTCAATGTATTGTGACATGGCTCTGCTGTTCATACCAAT 730233 Query 33189 AAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCA-ATGGATACCGCATCTGTTA 33247 || | |||||| |||| |||| | |||||| | |||| ||| | || |||||| | | Sbjct 730232 GAGATCAACTGGTAGAGATTCAGTTACAAATTCCTTTTCACATGCA-ACAGCATCTTTGA 730174 Query 33248 TAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAA---ACATCAAAC 33304 |||| | ||| | ||| |||| | || | | ||||| | | ||||| Sbjct 730173 TAATGTCTATAATGATTTTTTCATCTAATCTATTTACGA---GTTTACTGTAGAGCAAAC 730117 Query 33305 ATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTC 33364 | || || | || || ||||| || || | |||||| | ||| ||||| || || | | Sbjct 730116 AAGCAAAGTTACAATGTAGACCTTCATCACGACTAATCAATTCATTGGAGAATGTCAAAC 730057 Query 33365 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGA 33424 | ||||||| || | || || |||||||| |||||| ||| ||| || |||| Sbjct 730056 CTGGCATTAAACCTCTTTTCTTTAGCCAAAAGATGGAACAGAAACTACCACTGAAAAAGA 729997 Query 33425 TTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCC 33484 | ||||| || || ||||| || | | ||||||| || | | || || |||| Sbjct 729996 TACCTTCAACAGCTGCAAATGCCACCAATCTCTCTGCAAAT---GATCTAGAATTGATCC 729940 Query 33485 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT-AAAG 33543 | | ||||| || ||||||||||| ||||| || || |||||||| ||||| || Sbjct 729939 ATCTCAAGGCCCATTCTGCCTTCTTTTTCACACATGGAATAGTTTCTATAGCATTGAATA 729880 Query 33544 AGATAGtttttttCATTACT--ATCTTTAACATAAGTATCGATCAAAAGACTA 33594 | ||| ||||| | || | ||||| ||| ||||| || ||||||||| Sbjct 729879 ATTTAGCTTTTT---GTTCTGGGTTTTTAATATATGTATCAATTAAAAGACTA 729830 >seq33 Length=884058 Score = 138 bits (152), Expect = 1e-27 Identities = 389/592 (66%), Gaps = 4/592 (1%) Strand=Plus/Minus Query 63216 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 63274 || |||| ||||||||||||| ||||||||| || ||| |||| || | | | | Sbjct 110875 ACACGTTCCATAAAGAGATCACAAATCCAAAGGGC-ATAGAATAAGTCACGAGCACGAAT 110817 Query 63275 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63334 || || || || ||| || || ||||| | |||| | | | ||||| ||||| || Sbjct 110816 CTCTTCCTTACCATGATTTTTCTTTAGATCCAAGAACTCAAAGACATCAGCGTGCCATGG 110757 Query 63335 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63394 || ||||||| || | | | || | || ||||| || |||| || | ||| Sbjct 110756 CTCTAAGTATACTGCAAAAGCACCTTTTCTCTTACCGCCTCCTTGGTCTACATAACGAGC 110697 Query 63395 GGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGA 63454 |||| ||| | || | |||||||| | | ||| || || | || || || || Sbjct 110696 AGTGTCGTTAAATACACGTAACATTGGTACTAAACCATTGGAAGTTCCGTTAGTTCCACG 110637 Query 63455 GATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 63514 ||||||| | | |||||||| || || || | ||| ||||| || || ||| Sbjct 110636 GATATAGGATTGAGCAGCACGAATCTTGTGAACTGCAATACCAATTCCACCAGCAGATTT 110577 Query 63515 AGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCAT 63574 | || ||||||||| |||| || || || |||||||| || ||| ||| || |||| Sbjct 110576 ACTAATCAATGCGCATTGTTTCAAAGTATCGTAGATACCGTCAATGGAATCCTCTTTCAT 110517 Query 63575 GTTAAGTAGAAAACAGCTAGACATTTG-GTGACGACTAGTTCCCGCATTAAATAAGGTAG 63633 | || | ||||| ||||| || | || | || || ||||| || || |||| Sbjct 110516 TTGAACCAAGAAACAAGATGACATCTGAGGGAATGGT-GTACCAGCATTGAACAATGTAG 110458 Query 63634 GAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA 63693 ||| ||| || |||||| | || || || | || ||||||| ||| | || | Sbjct 110457 GAGTAGCATGAGTAAACAACTTCATGGAGAGCTTTTCATAAGTCTCAAAAGCAGCGTTCA 110398 Query 63694 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 63753 || | ||| || || | | ||| | ||| ||||| || ||||||||||| || | Sbjct 110397 AGTCAGTTCCATGTATACCAATAGAGACTCTCATCAACATATGTTGAGGTCTTTCCACAA 110338 Query 63754 TCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63805 | | || || ||| || ||| |||||||||| ||||||||||| Sbjct 110337 TGATACCATTGATACGTTGCAAATATGATCTTTCCAAAGTCTTAAAACCAAA 110286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946779510640