Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq33 197 4e-45 seq36 118 3e-21 seq30 104 6e-17 >seq33 Length=884058 Score = 197 bits (218), Expect = 4e-45 Identities = 627/949 (66%), Gaps = 31/949 (3%) Strand=Plus/Plus Query 363373 GATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATC 363432 ||| | || |||||| | || || | |||||| |||| | ||| || | |||||| Sbjct 110268 GATTTTGACTATGATTTCTTTGGTTTTAAGACTTTGGAAAGATCATATTTGCAACGTATC 110327 Query 363433 AATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCAT 363492 |||||| ||||| ||| | || || |||||||| ||| | || |||||||||| ||| Sbjct 110328 AATGGTATCATTGTGGAAAGACCTCAACATATGTTGATGAGAGTCTCTATTGGTATACAT 110387 Query 363493 TGCCCGGATGTTGATGCCGCGATTGAAACATAT---AAGCTTCTAAGTGCTCGTGTATTC 363549 | | || | | || || |||| || ||| |||| ||| || || | || Sbjct 110388 GGAACTGACTTGAACGCTGCTTTTGAGACTTATGAAAAGC-TCTCCATG-AAGT-TGTTT 110444 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609 || || || || || ||| ||| ||||||||| || | || |||||||| ||||| Sbjct 110445 ACTCATGCTACTCCTACATTGTTCAATGCTGGTACACCATTCCCTCAGATGTCATCTTG- 110503 Query 363610 TTTCTT-CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTG 363668 |||||| | ||||||| || |||||||| || ||||||| || || | || | || Sbjct 110504 TTTCTTGGTTCAAATGAAAGAGGATTCCATTGACGGTATCTACGATACTTTGAAACAATG 110563 Query 363669 TGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACA 363728 || | ||| || ||| || ||||||||| | | | ||||| |||||| | Sbjct 110564 CGCATTGATTAGTAAATCTGCTGGTGGAATTGGTATTGCAGTTCACAAGATTCGTG--CT 110621 Query 363729 GAACAGT--TACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786 | || | || || || || || ||| || ||||| | || || ||| | ||| Sbjct 110622 GCTCAATCCTATATCCGTGGAACTAACGGAACTTCCAATGGTTTAGTACCAATGTTACGT 110681 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 || ||| || | ||||| | || || ||||| || || || ||| | ||||| || ||| Sbjct 110682 GTATTTAACGACACTGCTCGTTATGTAGACCAAGGAGGCGGTAAGAGAAAAGGTGCTTTT 110741 Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA- 363905 || | || | ||||| || || ||| | |||||||| | || || |||||| Sbjct 110742 GCAGTATACTTAGAGCCATGGCACGCTGATGTCTTTGAGTTCTTGGATCTAAAGAAAAAT 110801 Query 363906 CACGGGAA--AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 || || || ||||| ||| ||||| ||||| | |||||||| |||||| ||| ||| Sbjct 110802 CATGGTAAGGAAGAG--ATT-CGTGCTCGTGACTTATTCTATGCCCTTTGGATTTGTGAT 110858 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGT 364023 | |||||| | || || | | | | ||||||| |||||||| || | || Sbjct 110859 CTCTTTATGGAACGTGTTCCTGGAAATGAAGATTGGTCCCTCTTTTGTCCTAATGAGGCC 110918 Query 364024 CCAGGTCTTTCCGA-TG-TATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATG- 364078 |||||||| | || || || || || || | | || ||| ||| |||| Sbjct 110919 CCAGGTCTCGCAGAGTGCCAT--GGAGAGGAATTCAGAAAACTTTATCTCAAA--TATGA 110974 Query 364079 --AATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCAT 364136 || | ||| ||| | || || || || | | |||||||| || | Sbjct 110975 ACAAACTCCAGGATTAGCTAGAAAAGTTGTTAAGGCTCAAGATTTGTGGTTTGCTATTGT 111034 Query 364137 GGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAA 364196 ||| || || ||||| || || ||||| ||||| | ||||||||| | || || || Sbjct 111035 GGAATCTCAAATTGAAACTGGTACACCTTATATTCTCTACAAAGATGCTTGTAATGAGAA 111094 Query 364197 GTCCAACCAGCAGCACCTTGGTA-CAATTCAGCAGAGCAACCTATGTACCGAGATTATTG 364255 || || || || || | |||| || |||| || ||| | ||||| ||||||||| Sbjct 111095 ATCAAATCAAAAGAACTTGGGTACCATTTCATCA-TCCAATTTGTGTACTGAGATTATTC 111153 Query 364256 AATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGC 364304 ||||||| |||| || || || || ||||||||||| || || || Sbjct 111154 AATACACATCTCCAGAGGAAGTCGCAGTTTGTAACCTTGCCTCTATTGC 111202 >seq36 Length=2033623 Score = 118 bits (130), Expect = 3e-21 Identities = 217/311 (70%), Gaps = 9/311 (3%) Strand=Plus/Plus Query 22048 GAGAATAAAGATCGTTTCGTACTATTTCCGATTGTACACGAAGATATTTATGAAGAA-TA 22106 ||||| || ||| | || || |||||||| ||| | || ||| || | ||| | || Sbjct 729460 GAGAACAAGGATAGATTTGTTCTATTTCCAATTAAATACCCAGACATATG-GAATATGTA 729518 Query 22107 CAAGAAAGCAGAAGCTTCCCTATGGGGTGTTTCCGAAATTGATATTTCCACTGATAAGAC 22166 || |||||||||| || | ||| | || |||||| | ||| ||||| | Sbjct 729519 TAAACAAGCAGAAGCCTCATTCTGGACAGCAGAAGAGATTGATTTAGCCAGTGATATCAA 729578 Query 22167 GGATTGGCCAAA--ACTTACA-GAAAACGAACAACATTTTAT--CAAATATATTCTAGCA 22221 || ||| ||| | ||| | ||||| ||| ||||||| || | ||| |||| |||| Sbjct 729579 TGAATGGGAAAATAAGTTAAATGAAAATGAAAAACATTTCATTTCCAATGTATT--AGCA 729636 Query 22222 TTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCTGAA 22281 || ||||| | |||| ||||| ||| ||| ||||||| ||||| ||| |||| Sbjct 729637 TTTTTTGCAGCTTCAGATGGTATTGTTAATGAAAATCTAGCAACTAAATTTATGAGTGAA 729696 Query 22282 ATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTTCAC 22341 ||||| ||||| |||||||||||||||||| | ||||| ||||||||| |||| Sbjct 729697 GTTCAAATACCAGAAGCCAGATGTTTCTATGGTTTCCAAATTGCCATTGAAAATATTCAT 729756 Query 22342 GCGGAAACATA 22352 | ||||| || Sbjct 729757 TCTGAAACTTA 729767 Score = 114 bits (126), Expect = 3e-20 Identities = 336/515 (65%), Gaps = 12/515 (2%) Strand=Plus/Plus Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTCATTCGCGGAACGT 22494 || || |||||||| ||||| ||| |||||| |||| | ||||| || || | Sbjct 729912 AAAAAGAAGGCAGAATGGGCCTTGAGATGGAT---CAATTCTAGATCATTTGCAGAGAGA 729968 Query 22495 CTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTT 22554 | | |||||||| | |||||||| || || || ||| || ||| | |||||| Sbjct 729969 TTGGTGGCATTTGCAGCTGTTGAAGGTATCTTTTTCAGTGGTAGTTTCTGTTCCATCTTT 730028 Query 22555 TGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGA 22614 |||||||| ||| | | | ||||| ||| | || || || ||||| || ||||| || Sbjct 730029 TGGCTAAAGAAAAGAGGTTTAATGCCAGGTTTGACATTCTCCAATGAATTGATTAGTCGT 730088 Query 22615 GATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAA 22674 ||||| ||||| ||| | ||||| ||| |||| || | || | || | ||| | Sbjct 730089 GATGAAGGTCTACATTGTAACTTTGCTTGTTTGCTCTACAGTAAAC---TCGTAAATAGA 730145 Query 22675 CTTCCATATGAAACTGTACTT---GATATTATTACAAATGCAGTTGAACTTGAACGTCTA 22731 | | |||||| | || || ||||| | | |||| |||| | |||| | Sbjct 730146 TT---AGATGAAAAAATCATTATAGACATTATCAAAGATGCTGTTGCATGTGAAAAGGAA 730202 Query 22732 TTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACA 22791 ||| | || | ||||||| |||||||||||| || | | | ||| | Sbjct 730203 TTTGTAACTGAATCTCTACCAGTTGATCTCATTGGTATGAACAGCAGAGCCATGTCACAA 730262 Query 22792 TATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAAC 22851 || ||| | ||| |||||||||||| | | || || ||||| |||| || ||| Sbjct 730263 TACATTGAGTTTTGCGCAGATCGTCTAGTTGTCTCTCTTGGTTACAAAAAGATTTTTAAT 730322 Query 22852 GTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTC 22911 ||||| || || ||||||||| | ||||| | || |||| | || || || Sbjct 730323 TCTACCAATCCTTTCGATTGGATGGAAATGATTTCTTTGCAAAGAAAATCAAACTTTTTT 730382 Query 22912 GAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGT 22946 ||| | ||| | |||||| ||||| | ||||| Sbjct 730383 GAAGGTAAAGTAGCTGAATATCAAAAGACTGGTGT 730417 >seq30 Length=714265 Score = 104 bits (114), Expect = 6e-17 Identities = 330/506 (65%), Gaps = 22/506 (4%) Strand=Plus/Minus Query 145292 ATTTTTATCGGTTCGCACTTTGATAAAACGAGGAAAACGAAGAGCAATACCCTTATTTGG 145351 ||| ||||| | || ||| | |||||| || || | | ||||||||| ||| || Sbjct 436614 ATTCTTATCAGGTCTCACACGAACAAAACGTGGGAATCTCAAAGCAATACCTTTAACAGG 436555 Query 145352 GTCAACGATTCCATGTCCTGCCATGTGAACCGGAGAAATTGACAAATCTGCCGACAATAC 145411 ||||| || || ||| | | |||| || || | ||| | ||| || | || Sbjct 436554 ATCAACAATACCCGATCCACCAGTATGAATTGGTGACACTGAAAGATCAGCAGCTTTAAC 436495 Query 145412 TTCCCATACTTGAGTTGGACTAAACCAAACATCTGGTTTAAGCGATGGTACATCTGCGAC 145471 ||||| |||||| ||||| | ||||||| ||| ||||| | || | ||| | || Sbjct 436494 CTCCCAAACTTGAATTGGATTGAACCAAAGATCAGGTTTCA---ATTGATCATTAAC-AC 436439 Query 145472 ATAGTAATCAGACGGTTTCTG-----TGGTACAATATGTGGCGTAAGACTGTCGGACAAT 145526 | ||| | || ||||| ||||| ||||||||| || | | || | ||| Sbjct 436438 ---GGAAT-ATAC---TTCTGGCATTTGGTATAATATGTGGTGTTAAAGCCTCTGTAAAT 436386 Query 145527 TGAATTAAATCTTCATCTGAAAATCCAGTTCCGATCTTGCATACACTTTGGAACACTTCT 145586 | ||||| |||||| ||| ||||| || || || || || ||||||| | || Sbjct 436385 GAAGTTAAAAGTTCATCACTAAAACCAGTGCCAATTTTACAAACTGTTTGGAATTCATCA 436326 Query 145587 TCGTCTGGATCATACACCGCAAGAAGGTATGCACCATATACACCAGTACGTTTTCCGCGA 145646 ||| ||||| || || | || |||||||| |||||||| | || || | Sbjct 436325 GAATCTTCGTCATAACATGCCAGTAAATAGGCACCATAGACACCAGTTCTCTTACCTTTA 436266 Query 145647 CCGGTATACCCCGC---AATTGGTACAAGATCACAACTATCACCCATTCCGGCAAGATAA 145703 || ||||| || ||| || || | ||| |||||||| ||| || |||||| Sbjct 436265 CC---ATACCAAGCTCCAATAGGAACCAAATCTAAACTATCAGTCATACCTTGTAGATAA 436209 Query 145704 TCCTTTTTAAGTTTTAGCCAATTGAGAGAACGTTTCGATGGTTCATAGCTAGAGTTATCG 145763 ||||| || | |||| ||||||| || | | | ||||||||||| | || || || Sbjct 436208 TCCTTCTTGATCTTTAACCAATTGTATGATCTTCTTGATGGTTCATACATTGACTTTTCA 436149 Query 145764 TCCAATGATTTTACCATTAGCCCCTC 145789 ||| | || ||||||| ||||| Sbjct 436148 GTCAAAGTCTTAACCATTAAACCCTC 436123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352698242228