Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq27 138 1e-27 seq38 104 2e-17 seq30 91.5 1e-13 seq31 84.2 2e-11 >seq27 Length=1864556 Score = 138 bits (152), Expect = 1e-27 Identities = 171/232 (74%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343 |||||||||||||| || || | || || ||||| |||||| | ||| || || || Sbjct 1695937 ATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACAATTACCCTTGAAGTTGAAGGTTCA 1695878 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | | ||| ||| | | |||||| |||||| ||||||||||| |||| || | Sbjct 1695877 G--ATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATCCCACCCGACC 1695820 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||||||||||||| ||| || |||||||||||||||| | ||| | |||| |||| Sbjct 1695819 AACAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCCGACTATA 1695760 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 ||||||||||||| || ||| | || |||| | ||||| |||| || || Sbjct 1695759 ACATTCAAAAAGAATCCACTCTTCACTTGGTTCTCAGATTAAGAGGTGGTAA 1695708 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343 |||||||||||||| || || | || || ||||| |||||| | ||| || || || Sbjct 1617506 ATGCAAATTTTTGTAAAGACCTTAACTGGTAAAACAATTACCCTTGAAGTTGAAGGTTCA 1617565 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | |||| ||| | | |||||| |||||| || |||||||| | || |||| Sbjct 1617566 G--ACACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCACCCGATC 1617623 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||||||||||||| || || |||||||||||||| | | ||| | | ||||||| Sbjct 1617624 AACAAAGACTTATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACATTATCTGATTATA 1617683 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||||| || ||| | || |||| | ||||| |||| || Sbjct 1617684 ACATTCAAAAAGAATCCACTCTTCACTTGGTTCTCAGATTAAGAGGTGG 1617732 Score = 118 bits (130), Expect = 9e-22 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 115280 TTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG 115339 |||| ||||||||| ||||| ||||| | || || ||||| |||||| | ||| || Sbjct 1696171 TTAATAATGCAAATCTTTGTTAAAACCTTAACTGGTAAAACTATTACCTTAGAAGTTGAA 1696112 Query 115340 TCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTT 115399 | ||||| ||| | | ||||| |||||| ||||||||||| |||| Sbjct 1696111 GGCTCAGACACCATTGAAAACGTAAAGGCCAAAATTCAAGATAAAGAAGGTATCCCACCC 1696052 Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 || || ||||||||||||| || || |||||||||||||| | || | ||||| Sbjct 1696051 GACCAACAAAGACTTATTTTCGCCGGTAAACAATTAGAAGACGGTCGTACTCTTTCCGAT 1695992 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||| |||||||| || || ||||| | || | ||||| |||| || Sbjct 1695991 TATAACATCCAAAAAGAATCAACATTACATTTAGTACTCAGATTAAGAGGTGG 1695939 Score = 116 bits (128), Expect = 3e-21 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GT 115340 ||||||||||||||||| ||||| | || || ||||| |||||| | ||| || || Sbjct 1617275 AAAATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACTATTACCTTAGAAGTCGAAGGT 1617334 Query 115341 CCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400 | |||||| ||| | | || ||| |||||| ||||||||||| | || | Sbjct 1617335 TC--CGACACCATTGAAAATGTCAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCCG 1617392 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 |||| |||||| | || | ||| || |||||||||||||||| || | | |||| Sbjct 1617393 ATCAACAAAGATTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGATT 1617452 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 | |||||||||||||| || || ||||| | || | ||||| |||| || Sbjct 1617453 ACAACATTCAAAAAGAATCAACATTACATTTAGTACTCAGATTAAGAGGTGG 1617504 Score = 105 bits (116), Expect = 6e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343 |||||||||||||| ||||| | || || |||||||||||| | ||| || || | Sbjct 1617734 ATGCAAATTTTTGTTAAAACTTTGACTGGTAAAACCATTACCTTAGAAGTAGAAGGTTC- 1617792 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 |||||| ||| | | ||||| |||||| || |||||||| |||| || | Sbjct 1617793 -CGACACCATTGAAAACGTAAAGGCTAAAATTCAAGACAAAGAAGGTATCCCACCCGACC 1617851 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | |||||||| |||| || || |||||||||||||||| || | | ||||| | Sbjct 1617852 AACAAAGACTCATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACA 1617911 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||| |||||||| || || | ||| | || | ||||| |||| || Sbjct 1617912 ACATCCAAAAAGAATCAACCCTCCATTTAGTACTCAGATTAAGAGGTGG 1617960 Score = 102 bits (112), Expect = 7e-17 Identities = 163/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343 |||||||||||||| || || | || || ||||| |||||| | ||| || || || Sbjct 1617962 ATGCAAATTTTTGTAAAGACCTTGACTGGTAAAACTATTACCCTTGAAGTTGAAGGTTCA 1618021 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | | || ||| | | |||||| |||||| || |||||||| | || || | Sbjct 1618022 G--ATACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCACCCGACC 1618079 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | |||||| | || | ||| || |||||||||||||||| ||| | | ||||| | Sbjct 1618080 AACAAAGATTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACCCTCTCTGATTACA 1618139 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 ||||||||||||| || ||| | ||| | || | ||||| |||| || || Sbjct 1618140 ACATTCAAAAAGAATCCACTCTCCATTTAGTTCTCAGATTAAGAGGTGGTAA 1618191 >seq38 Length=878590 Score = 104 bits (114), Expect = 2e-17 Identities = 168/237 (71%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 115280 TTAAA-AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA 115338 ||||| ||||||||| ||||| ||||| | || || |||||||||||| | ||| || Sbjct 148176 TTAAACAATGCAAATCTTTGTTAAAACATTAACTGGTAAAACCATTACCCTAGAAGTTGA 148235 Query 115339 --GTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCC 115396 || | |||||| | | | | || ||| ||||| ||||||||||| |||| Sbjct 148236 AGGTTC--CGACACCATCGAAAATGTCAAAGCCAAAATCCAAGATAAAGAAGGTATCCCA 148293 Query 115397 GTTGATCAGCAAAGACTTATTTATGC-GGGCAAACAATTAGAAGATGACAAAACCATGGC 115455 ||||| |||||||| |||| || || |||||||||||||||| || | | Sbjct 148294 CCCGATCAACAAAGACTCATTTTCGCTCGGTAAACAATTAGAAGATGGTCGTACTCTCTC 148353 Query 115456 CGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||| ||||| |||||||| || || | ||| |||| | ||| | |||| || Sbjct 148354 CGATTACAACATCCAAAAAGAATCAACCCTCCATTTGGTACTCAGACTCAGAGGTGG 148410 Score = 102 bits (112), Expect = 7e-17 Identities = 163/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343 |||||||| ||||| || || | || || || ||||||||| | ||| || || | Sbjct 148868 ATGCAAATCTTTGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTTGAAGGTTCT 148927 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | | || | | | | || ||| ||||| ||||||||||| |||| || | Sbjct 148928 G--ATACCATCGAAAATGTCAAAGCCAAAATCCAAGATAAAGAAGGTATCCCACCCGACC 148985 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | |||||||| |||| ||| || |||||||||||||||| || | | ||||| | Sbjct 148986 AACAAAGACTCATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACA 149045 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 ||||||||||||| |||||| | ||| | || | ||||| ||||||| || Sbjct 149046 ACATTCAAAAAGAATCTACTCTCCATCTTGTTCTTAGATTAAGAGGAGGTAA 149097 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343 |||||||||||||| || || | || || || ||||||||| | ||| || || | Sbjct 148640 ATGCAAATTTTTGTTAAGACCTTAACTGGTAAGACCATTACCCTTGAAGTTGAAGGTTC- 148698 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 |||||| ||| | | ||||| || ||| || |||||||| |||| || | Sbjct 148699 -CGACACCATTGAAAACGTAAAGGCTAAGATTCAAGACAAAGAAGGTATCCCACCCGACC 148757 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | |||||||| |||| || || |||||||||||||||| || | | ||||| | Sbjct 148758 AACAAAGACTCATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACA 148817 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||| |||||||| || || | ||| |||| | ||| | |||| || Sbjct 148818 ACATCCAAAAAGAATCAACCCTCCATTTGGTACTCAGACTCAGAGGTGG 148866 >seq30 Length=714265 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/230 (70%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCA-TTACCGTCGAAACGGA--GTCC 115342 |||||||||||||||||||| | || || ||||||| ||||| | ||| || | | Sbjct 356320 ATGCAAATTTTTGTCAAAACCTTGACTGGTAAAACCAATTACCTTGGAAGTTGAAGGATC 356379 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || | ||| ||| | || || || ||| ||||||||||| |||| ||| Sbjct 356380 AG--ATACTATTGAGAATGTCAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCCGAT 356437 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 || ||||||||||||| ||| || |||||||| ||||||| || | | || || Sbjct 356438 CAACAAAGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGACTAC 356497 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || |||||||| || || ||| | ||| | || | ||| | |||| || Sbjct 356498 AATATTCAAAAGGAATCAACTCTCCATTTAGTTCTCAGACTTAGAGGTGG 356547 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343 |||||||| ||||| || || || || || |||||||||||| | ||| || | || Sbjct 356549 ATGCAAATCTTTGTAAAGACTCTTACAGGTAAAACCATTACCTTGGAAGTTGAAGGATCA 356608 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | | ||| ||| | || || || ||| ||||||||||| |||| || | Sbjct 356609 G--ATACTATTGAGAATGTTAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCCGACC 356666 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | |||||||| |||| ||| || |||||||| ||||||| || | | || || | Sbjct 356667 AACAAAGACTCATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTATCTGACTACA 356726 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 | || |||||||| |||||| | ||| | || | ||| | |||| || || Sbjct 356727 ATATCCAAAAAGAATCTACTCTCCATTTAGTACTCAGACTTAGAGGTGGTAA 356778 >seq31 Length=145395 Score = 84.2 bits (92), Expect = 2e-11 Identities = 168/247 (68%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 115268 ATTTATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACC 115327 || ||| ||| || || |||||||| ||||| || || | || || || || |||||| Sbjct 8741 ATATATTAGAAATAAATTATGCAAATATTTGTAAAGACTTTGACTGGTAAGACAATTACC 8682 Query 115328 GTCGAAACGGA--GTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAG 115385 | || || || | | | || ||| | | || ||| ||||| ||||||| Sbjct 8681 TTAGAGGTAGAAGGTTCTG--ATACCATTGAAAATGTTAAAACCAAAATCCAAGATAAAG 8624 Query 115386 AAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACA 115445 | || |||| || || ||||||||||||| ||| || |||||||| ||||||| Sbjct 8623 AGGGTATCCCACCCGACCAACAAAGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTC 8564 Query 115446 AAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGC 115505 || | | || ||||||||||||||||| || || ||||| | || | ||| | Sbjct 8563 GTACTTTATCTGACTATAACATTCAAAAAGAATCAACACTACATTTAGTTCTCAGACTTA 8504 Query 115506 GAGGAGG 115512 |||| || Sbjct 8503 GAGGTGG 8497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343720070480