Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq30 104 2e-17 seq12 96.9 3e-15 seq27 84.2 2e-11 >seq30 Length=714265 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || |||||||| | ||| || || ||||| || |||||||| | || || ||| Sbjct 370255 AGTACTAAATGGAGGGTAGATTCTTTTTGGATATTGTAATCAGAGAGAGTACGACCGTCT 370196 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || | || || || ||| |||||||||| || || || || ||||| ||||||||||| Sbjct 370195 TCCAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCGGGTGGGATACCTTCTTTGTCT 370136 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC--TCGATGTCGACGGTAACGG 131200 |||||| ||||| | || | ||||| || || |||| || | ||| | || Sbjct 370135 TGGATTTTGGCCTTGACGTTTTCGATGGTATC--TGAACCTTCGACTTCTAAGGTGATGG 370078 Query 131201 TTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 ||||||| |||| |||||| || || || |||||| Sbjct 370077 TTTTACCAGTTAAAGTTTTAACAAAGATTTGCATG 370043 >seq12 Length=1224149 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || |||||||| | ||| || || ||||| || |||||||| | ||| || ||| Sbjct 427402 AGGACTAAATGGAGGGTTGATTCTTTTTGGATATTGTAATCAGAGAGGGTACGACCGTCT 427343 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 |||| || || || || |||| | | || || || || ||||| ||||||||||| Sbjct 427342 TCTAATTGTTTACCGGCAAAGATAAGTCTTTGTTGATCGGGTGGGATACCTTCTTTGTCT 427283 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC--TCGATGTCGACGGTAACGG 131200 |||||| ||||| | || | ||||| || || || | || | ||||| || Sbjct 427282 TGGATTTTGGCCTTGACATTTTCGATGGTATC--TGAACCTTCAACTTCTAAGGTAATGG 427225 Query 131201 TTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | ||||| |||| |||||| |||||||||||||| Sbjct 427224 TCTTACCAGTTAAAGTTTTAACGAAAATCTGCAT 427191 >seq27 Length=1864556 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || |||||||||| || || || ||||||||||||||||| | || || || Sbjct 1617489 AGTACTAAATGTAATGTTGATTCTTTTTGAATGTTGTAATCAGAGAGAGTACGACCATCT 1617430 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 |||| || || || || ||||||| | || || || || || || |||||||| || Sbjct 1617429 TCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGATCGGGTGGAATACCTTCTTTATC- 1617371 Query 131143 GTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| ||| || |||| | || | || |||| |||| || | ||||| || Sbjct 1617370 TTGAATTTTGGCTTTGACATTTTCAATGGTGTCGGAACCTTCGACTTCTAAGGTAATAGT 1617311 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||||| |||| |||||| || ||||| ||||| Sbjct 1617310 TTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1617278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012481391360