Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq36 187 3e-42 seq33 168 8e-37 >seq36 Length=2033623 Score = 187 bits (206), Expect = 3e-42 Identities = 218/294 (74%), Gaps = 3/294 (1%) Strand=Plus/Minus Query 32956 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAA 33015 |||| |||||||| ||||||||||| ||||| || || ||||| ||||| || || | | Sbjct 729763 TTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTGGTA 729704 Query 33016 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 33075 | || ||||| | |||| ||||| ||||||||| || || || || |||| Sbjct 729703 TTTGAACTTCACTCATAAATTTAGTTGCTAGATTTTCATTAACAATACCATCTGAAGCTG 729644 Query 33076 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT---CC 33132 ||||||| || ||||||| || |||| |||||| | | ||| ||||| || Sbjct 729643 CAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTATTTTCCC 729584 Query 33133 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 | ||||||||||| | | || ||| | ||||| ||||||| ||||| || ||||| | Sbjct 729583 ATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCTGCTT 729524 Query 33193 TTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTAT 33246 ||||||||||||||| ||||| | |||| ||||||||| | ||||||||||| Sbjct 729523 GTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATCTAT 729470 Score = 149 bits (164), Expect = 8e-31 Identities = 399/595 (67%), Gaps = 29/595 (5%) Strand=Plus/Minus Query 32370 TTTTGGTATTCACCCACACGTTT---TTCGAAAAAATTAGTTTTACCTTCTAATGATATA 32426 ||||| |||||| | || ||| ||| ||||| || | ||| | || || || || Sbjct 730408 TTTTGATATTCAGCTAC---TTTACCTTCAAAAAAGTTTGATTTTCTTTGCAAAGAAATC 730352 Query 32427 TTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAA 32486 ||||||| ||||||| ||||||||| |||| |||| ||||| | || || ||| Sbjct 730351 ATTTCCATCCAATCGAAAGGATTGGTAGAATTAAAAATCTTTTTGTAACC-AAGAGAGAC 730293 Query 32487 ATCAAT-CTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 32545 | | | | ||||||| ||| || || ||| | ||| | | ||||| || || Sbjct 730292 AACTAGACGATCTGCGCAAAACTCAATGTATTGTGACATGGCTCTGCTGTTCATACCAAT 730233 Query 32546 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 32605 || | |||||| |||| |||| | |||||| | |||| | || || ||| | || Sbjct 730232 GAGATCAACTGGTAGAGATTCAGTTACAAATTCCTTTTCACATGCAACAGCATCTTTGAT 730173 Query 32606 AATAGATCT-TACTG-TTTCTTCACTCGGTGGATACAATAAATGTTTAA---ACATCAAA 32660 ||| ||| || || ||| |||| | || | | ||||| | | |||| Sbjct 730172 AATG--TCTATAATGATTTTTTCATCTAATCTATTTACGA---GTTTACTGTAGAGCAAA 730118 Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || | || |||||||| || || | |||||| ||||| ||||| || || | Sbjct 730117 CAAGCAAAGTTACAATGTAGACCTTCATCACGACTAATCAATTCATTGGAGAATGTCAAA 730058 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGA-CGCAAATGATCCAGAAAAGAA 32779 || ||||||| || | || || |||||||| ||||| | ||| | ||| || || Sbjct 730057 CCTGGCATTAAACCTCTTTTCTTTAGCCAAAAGATGGAACAGAAACTA-CCACTGAAAAA 729999 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTAT 32839 || ||||| || || ||||| || | | ||||||| || | | || || || Sbjct 729998 GATACCTTCAACAGCTGCAAATGCCACCAATCTCTCTGCAAAT---GATCTAGAATTGAT 729942 Query 32840 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT-AA 32898 ||| | ||||| || ||||||||||| ||||| || || || ||||||||||| || Sbjct 729941 CCATCTCAAGGCCCATTCTGCCTTCTTTTTCACACATGGAATAGTTTCTATAGCATTGAA 729882 Query 32899 AGAGATAGtttttttCATTACT--ATCTTTAACATATGTATCAATCAAAAGACTA 32951 | ||| ||||| | || | ||||| |||||||||||| ||||||||| Sbjct 729881 TAATTTAGCTTTTT---GTTCTGGGTTTTTAATATATGTATCAATTAAAAGACTA 729830 >seq33 Length=884058 Score = 168 bits (186), Expect = 8e-37 Identities = 1087/1732 (63%), Gaps = 77/1732 (4%) Strand=Plus/Minus Query 61990 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTC 62049 ||| || || || || || ||||| |||||||| | || | | ||||| ||| || Sbjct 112001 TTGGTCAATAAAAGCACCTCTGTCAGCAGCCATATCAATCAAGGCTCTTTGTTTAATCTC 111942 Query 62050 CCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGA 62106 ||||| || || |||| | | || | ||| ||||||| | || |||| |||| || Sbjct 111941 CCAAACTGTCTTGTAAAGTTGTTTCAAATCCTCTGGAATCTCTGGAATATTTTGAACAGA 111882 Query 62107 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT--CCATAATTTTCTCTCGGTT 62164 |||| | ||| |||||| | || || | || |||| ||| | | ||| | Sbjct 111881 ACCACGGTGTGCTATAATCTTGTTTTTCAAGTC--CATTGACCACAGTCCAAGCTCCATA 111824 Query 62165 AAAACTCTAAGGAGATGCGGATTAACTACTTG-AAATTCTCCAGACAATACTCTCCGAGT 62223 | | | ||| | ||| ||||| || ||| |||||| || | || ||||| | | Sbjct 111823 AGATCAGAAAGCAATTGCTTATTAA-TAATTGTAAATTCACCTGCTAAGACTCTTCTGGA 111765 Query 62224 GTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGA 62283 || || ||||| || || ||||| | || |||||| || || ||||||||| || || Sbjct 111764 ATATATGTTACTAGTGTATGGTTCAAAAGCCTCATTGTTACCTAAAATTTGACTGGTGGA 111705 Query 62284 TGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATC 62343 || || ||||| || || | || | ||||||||||||| | | ||| | || Sbjct 111704 GGCTGTGGGCATTGGGGCTATTAAAAGTGAGTTTCTAAGACCGTGTTTGGCGATATCTTC 111645 Query 62344 TTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAG 62403 || || ||| |||||||||| |||| | || || ||| || Sbjct 111644 CTTGAGTTGTTTCCAATTCCAACGATCGGTTGGAGTGACACCCCACATATCGTATTGGAG 111585 Query 62404 AATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAG 62463 ||||| | ||| || || ||| ||| || ||||| ||||| | ||| || Sbjct 111584 TATACCTTGACTTGCTGGAGAACCTTGGAATGATGAATAGGGTCCATCCTTATGAGCGAG 111525 Query 62464 TTCACAACTC--GCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGA 62521 ||| ||| || ||| || | | || || || ||| | |||| |||| | | Sbjct 111524 TTCT--ACTGAGGCGCTTAAAGCTGCAAAGTAGATAGTCTCGGAAATCTCAATATTCA-A 111468 Query 62522 TCTTGCGCTTCCAGGCTAT-CAAATGGATAATTTAAGAG--AATAAACGCGTCTGCTAAT 62578 | | || || | || |||| || || ||| | || ||| | || || | Sbjct 111467 TTTAGCTGCACCTGTGGATTCAAAAGG-TAGACGAAGGGCTAAGAAAA-CATCAGCAAGA 111410 Query 62579 CCTTGAACACCAATACCGATAGGTCTATGTCTC---TTATTAGAGATTTCAGCTTCTGGA 62635 ||||||| ||||||||| || ||||| || | || ||| | | ||||||||| Sbjct 111409 CCTTGAATACCAATACCAATTGGTCTGTGACGGAGGTTGCTAG---TCTTAGCTTCTGGG 111353 Query 62636 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTA-CTTTG--ACC 62692 | ||||||||||| |||| ||||| || ||||||||||| || | ||||| || Sbjct 111352 ACTGGATAATAATTTCTATCAATAATCTTGTTGAGATTTCTAGTTATAATCTTTGTAACT 111293 Query 62693 ACAT------CCT-----------TCAG----TTTGAGAAAATCAAATC----------- 62720 ||| ||| ||| ||| | ||| | || Sbjct 111292 TCATATAAAGCCTGATGATCAAATTCAAAGGCTTTCTTATAATAAGATTCTGGATTGGTG 111233 Query 62721 ----GCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACC 62776 | | ||| | | |||| | ||||||| ||| || || |||||||| || || Sbjct 111232 TTAGGAACCTCTCTCAAAAACTTTGGTAATGCAATAGAGGCAAGGTTACAAACTGCGACT 111173 Query 62777 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCT 62836 || | | | | ||||| || |||||||| || | ||| | ||||| || Sbjct 111172 TCCTCTGGAGATGTGTATTGAATAATCTCAGTACACAAATTGGATGATGAAATGGTACCC 111113 Query 62837 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 62896 || || | |||||| || | ||||| ||||| || || ||||| | || |||||| Sbjct 111112 AAGTTCTTTTGATTTGATTTCTCATTACAAGCATCTTTGTAGAGAATATAAGGTGTACCA 111053 Query 62897 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTG 62956 |||||||| |||||||| | ||| || ||| | || ||||||| | | ||| Sbjct 111052 GTTTCAATTTGAGATTCCACAATAGCAAACCACAAATCTTGAGCCTTAACAACT--TTTC 110995 Query 62957 TATCT----CTTTTCTCT-TTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAA 63011 || || || | | ||| ||| ||| | | | ||| || ||||| Sbjct 110994 TAGCTAATCCTGGAGTTTGTTCATATTTGAGATAAAGTTTTCTGAATTCCTCTCCATGG- 110936 Query 63012 CATTGTCC-AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 63070 || | | | || || || |||| ||||| | | ||||| ||| | | | Sbjct 110935 CACTCTGCGAGACCTGGGGCCTCATTAGGACAAAAGAGGGACCAATCTTCATTTCCAGGA 110876 Query 63071 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 63129 || |||| ||||||||||||| ||||||||| || ||| |||| || | | | | Sbjct 110875 ACACGTTCCATAAAGAGATCACAAATCCAAAGGGC-ATAGAATAAGTCACGAGCACGAAT 110817 Query 63130 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63189 || || || || ||| || || ||||| | |||| | | | ||||| ||||| || Sbjct 110816 CTCTTCCTTACCATGATTTTTCTTTAGATCCAAGAACTCAAAGACATCAGCGTGCCATGG 110757 Query 63190 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63249 || ||||||| || | | | || | || ||||| || |||| || | ||| Sbjct 110756 CTCTAAGTATACTGCAAAAGCACCTTTTCTCTTACCGCCTCCTTGGTCTACATAACGAGC 110697 Query 63250 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGA 63309 |||| ||| | || | |||||||| | | ||||||||| || || || || || Sbjct 110696 AGTGTCGTTAAATACACGTAACATTGGTACTAAACCATTGGAAGTTCCGTTAGTTCCACG 110637 Query 63310 GATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 63369 ||||||| | | |||||||| || || || | ||| ||||| || || ||| Sbjct 110636 GATATAGGATTGAGCAGCACGAATCTTGTGAACTGCAATACCAATTCCACCAGCAGATTT 110577 Query 63370 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 63429 | || ||||||||| |||| || ||||| ||||| || || || ||| || |||| Sbjct 110576 ACTAATCAATGCGCATTGTTTCAAAGTATCGTAGATACCGTCAATGGAATCCTCTTTCAT 110517 Query 63430 GTTAAGTAGAAAACAGCTAGACATTTG-GTGACGACTAGTTCCCGCATTAAATAAGGTAG 63488 | || | ||||| ||||| || | || | || || ||||| || || |||| Sbjct 110516 TTGAACCAAGAAACAAGATGACATCTGAGGGAATGGT-GTACCAGCATTGAACAATGTAG 110458 Query 63489 GAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA 63548 ||| ||| ||||||||| | || || || | || ||||||| ||| | || | Sbjct 110457 GAGTAGCATGAGTAAACAACTTCATGGAGAGCTTTTCATAAGTCTCAAAAGCAGCGTTCA 110398 Query 63549 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 63608 || | ||| || || | | ||| | ||| ||||| || ||||||||||| || | Sbjct 110397 AGTCAGTTCCATGTATACCAATAGAGACTCTCATCAACATATGTTGAGGTCTTTCCACAA 110338 Query 63609 TCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63660 | | || || ||| || ||| |||||||||| ||||||||||| Sbjct 110337 TGATACCATTGATACGTTGCAAATATGATCTTTCCAAAGTCTTAAAACCAAA 110286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631572298400