Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq36 181 1e-40 >seq36 Length=2033623 Score = 181 bits (200), Expect = 1e-40 Identities = 226/309 (73%), Gaps = 3/309 (1%) Strand=Plus/Minus Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 |||||||||| | ||| || || ||||||||||| || ||||||||||| ||||| | | Sbjct 729763 TTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTGGTA 729704 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 | || ||||| |||| | | | ||||||||||| || |||||||| || |||| Sbjct 729703 TTTGAACTTCACTCATAAATTTAGTTGCTAGATTTTCATTAACAATACCATCTGAAGCTG 729644 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTA---TCCC 93566 ||||||| || |||| || || |||||||| |||| || || | |||| |||| Sbjct 729643 CAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTATTTTCCC 729584 Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626 | || | ||| | | | ||| | ||||| | ||||| || || |||||||||| Sbjct 729583 ATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCTGCTT 729524 Query 93627 TTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGT 93686 ||| ||||||| |||||||||| | |||| ||||||||||| ||||| | || || Sbjct 729523 GTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATCTATCCTTGT 729464 Query 93687 TATCTTTTA 93695 | ||||||| Sbjct 729463 TCTCTTTTA 729455 Score = 134 bits (148), Expect = 2e-26 Identities = 189/266 (71%), Gaps = 6/266 (2%) Strand=Plus/Minus Query 93070 TACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATAT 93129 ||||| | | |||| | || || ||||||| ||||| |||||| || || || Sbjct 730139 TACGAGTTTACTGTAGAGCAAACAAGCAAAGTTACAATGTAGACCTTCATCACGACTAAT 730080 Query 93130 CAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGA 93189 ||| |||||| |||||| |||||||| | | |||| |||||| |||||||| || || Sbjct 730079 CAATTCATTGGAGAATGTCAAACCTGGCATTAAACCTCTTTTCTTTAGCCAAAAGATGGA 730020 Query 93190 AGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGC 93249 | ||||||||| ||||| |||||||| || |||||||||||||| | | || || Sbjct 730019 ACAGAAACTACCACTGAAAAAGATACCTTCAACAGCTGCAAATGCCACCAATCTCTCTGC 729960 Query 93250 AAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACA 93309 ||| | |||| |||||||| | || ||||| || || || || || | ||| Sbjct 729959 AAATGATCTAGAAT------TGATCCATCTCAAGGCCCATTCTGCCTTCTTTTTCACACA 729906 Query 93310 AGGTAGTGTTTCGATAGCGTTAAATA 93335 || | ||||| ||||| || |||| Sbjct 729905 TGGAATAGTTTCTATAGCATTGAATA 729880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860424118960