Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq46 143 6e-29 >seq46 Length=277422 Score = 143 bits (158), Expect = 6e-29 Identities = 266/385 (69%), Gaps = 4/385 (1%) Strand=Plus/Plus Query 68406 CAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACT 68465 ||||| ||| | ||||| | |||||||| || ||||| |||||||| | |||| || Sbjct 48081 CAAGCCTCTACCTCAGAACTCTATGGAAAGGTACAAGAGATTCCTCAATCTGAAACCACA 48140 Query 68466 CCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAAA 68525 || ||||| || || ||| || | ||||| || | || |||||||| | | Sbjct 48141 CCTTTTTACCCACGTTCCCCCTATGCAGTTGCCAAACAATTTGCCTATTGGATTGTTGTA 48200 Query 68526 AATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAGT 68585 || ||| | ||| | ||||||||||| | ||| ||| || | ||||| |||||| Sbjct 48201 AACTACAGAGAGGCTTATAACATGTACGCATGTAACGGTATATTATTCAACCACGAGTCA 48260 Query 68586 CCCAACAGAGG-CCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTT 68644 || | ||||| ||| | || || ||| | |||||||| | | || || || || Sbjct 48261 CCAAGAAGAGGTCCAAC-CTTTGTAACTAGAAAAATCACTAGATTTGTTGCTAAAGTTGC 48319 Query 68645 CAATGGTGTCGAAAAATGC-ATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGAT 68703 | |||| || ||| || | | ||| | ||||| || |||| || | |||||||| Sbjct 48320 TACTGGT-TCTAAAGATACTCTCTATTTGGGTAACATCAATGCACAACGTGATTGGGGTC 48378 Query 68704 ATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACT 68763 |||| | || || ||||| ||||||||||| ||| | |||||||| | || | |||| Sbjct 48379 ATGCTAGAGACTATGTAGAGGCAATGTGGTTAATGTTACAACAAGAAAAACCACAAGACT 48438 Query 68764 ATGTGATTGCAACAGGGAAAACAAC 68788 ||| |||||||| || |||| || Sbjct 48439 TTGTCATTGCAACTGGTGAAACTAC 48463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879236944900