Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq38 82.4 8e-11 seq27 82.4 8e-11 >seq38 Length=878590 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||||||||| | | || | ||| | || || |||||||| |||||||||| Sbjct 149095 ACCTCCTCTTAATCTAAGAACAAGATGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGA 149036 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || |||| || |||||||| || ||||||| || ||||||| ||| Sbjct 149035 AAGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATGAGTCTTTGTTGGTCGGGTGG 148976 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || || || |||||| ||||| | | | || || ||| || Sbjct 148975 GATACCTTCTTTATCTTGGATTTTGGCTTTGACATTTTCGATGGTATCAGAACCTTCAAC 148916 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | || ||||| || || || | ||||| |||||||||||||| Sbjct 148915 TTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCAT 148868 >seq27 Length=1864556 Score = 82.4 bits (90), Expect = 8e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||||||| | | || ||||| ||||| || |||||||| |||||||||| Sbjct 1617505 ACCACCTCTTAATCTGAGTACTAAATGTAATGTTGATTCTTTTTGAATGTTGTAATCAGA 1617446 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || |||| || ||||| || || || | || || || |||| ||| Sbjct 1617445 GAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGATCGGGTGG 1617386 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | | || || || ||| |||| | ||||| | | | |||||| ||| | Sbjct 1617385 AATACCTTCTTTATCT-TGAATTTTGGCTTTGACATTTTCAATGGTGTCGGAACCTTCGA 1617327 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 | || | || || ||||| || |||| || || ||||| ||||||||||| Sbjct 1617326 CTTCTAAGGTAATAGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCATTTT 1617275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212433331360