Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq27 114 1e-20 seq31 113 4e-20 seq30 100 3e-16 seq38 98.7 1e-15 seq12 93.3 4e-14 >seq27 Length=1864556 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||||| |||| || |||||||||||||| || | |||||| || || Sbjct 1617486 ACTAAATGTAATGTTGATTCTTTTTGAATGTTGTAATCAGAGAGAGTACGACCATCTTCT 1617427 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||||| | |||||| | ||||| || || || ||||||||||| || || Sbjct 1617426 AATTGTTTACCGGCAAAGATTAATCTTTGTTGATCGGGTGGAATACCTTCTTTATCT-TG 1617368 Query 138526 ATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 | |||| | ||| | | ||| | |||||||| || || || | || | ||||| Sbjct 1617367 AATTTTGGCTTTGACATTTTCAATGGTGTCGGAACCTTCGACTTCTAAGGTAATAGTTTT 1617308 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| | |||||| |||||||| ||||| Sbjct 1617307 ACCAGTTAAAGTTTTAACAAAAATTTGCAT 1617278 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||| | | |||| || ||||| |||||||| || | |||||| || || Sbjct 1617942 ACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCT 1617883 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||||| | || || | |||||||| || || |||||||||||||| || Sbjct 1617882 AATTGTTTACCGGCGAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTGTCT-TG 1617824 Query 138526 ATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 | |||| | |||| | ||| | |||||||| || || || | || | ||||| Sbjct 1617823 AATTTTAGCCTTTACGTTTTCAATGGTGTCGGAACCTTCTACTTCTAAGGTAATGGTTTT 1617764 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||| |||||| |||||||| ||||| Sbjct 1617763 ACCAGTCAAAGTTTTAACAAAAATTTGCAT 1617734 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||| | | || || |||||||||||||| || | ||||| || || Sbjct 1618171 AACTAAATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGAGAGGGTACGACCATCTTC 1618112 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||||| | |||||| | |||||||| || || |||||||||||||| | Sbjct 1618111 TAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCGGGTGGAATACCTTCTTTGTCT-T 1618053 Query 138525 GATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || |||| | ||||| | ||| | ||| || | || || || | || | |||| Sbjct 1618052 GAATTTTGGCTTTTACATTTTCAATGGTATCTGAACCTTCAACTTCAAGGGTAATAGTTT 1617993 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||| || ||||||||||| ||||| Sbjct 1617992 TACCAGTCAAGGTCTTTACAAAAATTTGCAT 1617962 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||||| |||| || ||||| ||||| || ||| | |||||| ||| || Sbjct 1695957 ACTAAATGTAATGTTGATTCTTTTTGGATGTTATAATCGGAAAGAGTACGACCGTCTTCT 1696016 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||||| | || || | |||||||| || || ||||||||||| || || Sbjct 1696017 AATTGTTTACCGGCGAAAATAAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTATC-TTG 1696075 Query 138526 ATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 | |||| | |||| | ||| | |||||| | || || || | || | ||||| Sbjct 1696076 AATTTTGGCCTTTACGTTTTCAATGGTGTCTGAGCCTTCAACTTCTAAGGTAATAGTTTT 1696135 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| | ||||| ||||| || ||||| Sbjct 1696136 ACCAGTTAAGGTTTTAACAAAGATTTGCAT 1696165 >seq31 Length=145395 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||| | |||| || |||||||||||||| || | |||||| ||||| Sbjct 7829 AACTAAATGGAGTGTTGATTCTTTTTGAATGTTGTAATCAGAGAGAGTACGACCATCCTC 7888 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 ||||||||||| | | |||| || | |||||||| || || |||||||||||||| | Sbjct 7889 AAGTTGTTTACCAGCAAAGATAAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTGTC-TT 7947 Query 138525 GATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || |||| || |||| | ||| | ||| || | || || || | || | || | Sbjct 7948 GAATTTTGGTCTTTACATTTTCAATGGTATCAGAACCTTCAACTTCCAAAGTAATTGTCT 8007 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||| ||||| ||||| || ||||| Sbjct 8008 TACCAGTCAATGTTTTGACAAAGATTTGCAT 8038 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||||| |||| || ||||||||||| ||||| | |||||| || || Sbjct 8514 AACTAAATGTAGTGTTGATTCTTTTTGAATGTTATAGTCAGATAAAGTACGACCATCTTC 8573 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||| | | | || || | |||||||| || || ||||| ||||| || | Sbjct 8574 CAATTGTTTACCAGCAAAAATAAGTCTTTGTTGGTCGGGTGGGATACCCTCTTTATC-TT 8632 Query 138525 GATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 | |||| ||||||| | ||| | ||| || | || ||||| | || | || | Sbjct 8633 GGATTTTGGTTTTAACATTTTCAATGGTATCAGAACCTTCTACCTCTAAGGTAATTGTCT 8692 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||| ||| |||||||| || ||||| Sbjct 8693 TACCAGTCAAAGTCTTTACAAATATTTGCAT 8723 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||| | |||| |||||||| ||||| ||||| | ||||| || || Sbjct 8057 AACTAAATGGAGAGTTGATTCCTTTTGTATGTTATAGTCAGATAAGGTACGACCATCTTC 8116 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||| | | | || ||||| ||||| || || || ||||||||||| || | Sbjct 8117 CAATTGTTTACCAGCAAAAATGAGACGTTGTTGATCGGGTGGAATACCTTCTTTATC-TT 8175 Query 138525 GATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 | | |||||||||| | ||| | ||| || | || || || | || | || | Sbjct 8176 GGATCTTTGTTTTAACATTTTCAATGGTATCAGAACCTTCAACTTCCAAAGTAATTGTCT 8235 Query 138584 TACCAGTCAGAGTTTTT-ACAAAAATCTGCAT 138614 ||||||||| |||||| ||||||| ||||| Sbjct 8236 TACCAGTCAATGTTTTTGACAAAAAATTGCAT 8267 >seq30 Length=714265 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||| | | | || || ||||| || ||||| || | |||||| ||| || Sbjct 370252 ACTAAATGGAGGGTAGATTCTTTTTGGATATTGTAATCAGAGAGAGTACGACCGTCTTCC 370193 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||||| |||||| ||| ||||| || || || |||||||||||||| | Sbjct 370192 AATTGTTTACCGGCGAAGATTAAACGTTGTTGATCGGGTGGGATACCTTCTTTGTCTTGG 370133 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 ||||| || | | ||| | ||| || | || || || | || | |||||| Sbjct 370132 ATTTTGGCCTTGACGTTTTCGATGGTATCTGAACCTTCGACTTCTAAGGTGATGGTTTTA 370073 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| | |||||| ||||| || |||||| Sbjct 370072 CCAGTTAAAGTTTTAACAAAGATTTGCATG 370043 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||| | |||| || ||||| || |||||||| | |||||| || || Sbjct 356301 AACTAAATGGAGAGTTGATTCTTTTTGGATATTGTAGTCAGAAAGAGTACGACCATCTTC 356242 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||| | | | || ||||| |||||||| || || ||||||||||| || | Sbjct 356241 CAATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCGGGTGGGATACCTTCTTTATC-TT 356183 Query 138525 GATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 | | || || |||| | || | || || | || ||||| | || | |||| Sbjct 356182 GGATCTTGGTCTTAACATTCTCTATAGTATCAGAACCTTCTACCTCCAAGGTAATTGTTT 356123 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| |||| |||||| |||||||| ||||| Sbjct 356122 TACCTGTCAAAGTTTTAACAAAAATTTGCAT 356092 >seq38 Length=878590 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 || ||||| | |||| || ||||| |||||||| || | |||||| || || Sbjct 148620 ACCAAATGGAGAGTTGATTCTTTTTGGATGTTGTAATCAGAGAGAGTACGACCATCTTCT 148561 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||||| | |||||| ||| |||||||| || || ||||||||||| || | Sbjct 148560 AATTGTTTACCGGCAAAGATTAAACGTTGTTGGTCGGGTGGGATACCTTCTTTATCTTGG 148501 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 ||||| ||| | | ||| | ||| || | || || || | || | || ||| Sbjct 148500 ATTTTAGCTTTGACATTTTCGATGGTATCAGAACCTTCAACTTCAAGGGTAATGGTCTTA 148441 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| || || |||||||| ||||| Sbjct 148440 CCAGTCAAGGTCTTAACAAAAATTTGCAT 148412 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/219 (69%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 || ||||| | | |||| || ||||| |||||||| ||| | |||||| || || Sbjct 148392 ACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCGGAGAGAGTACGACCATCTTCT 148333 Query 138466 AGTTGTTTACCG-GAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | |||||||||| | | || || | ||||| || || || ||||||||||| || Sbjct 148332 AATTGTTTACCGAGCGAAAATGAGTCTTTGTTGATCGGGTGGGATACCTTCTTTATCTTG 148273 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 |||||| ||| | | ||| | |||||||| || || || | || | ||||| Sbjct 148272 GATTTTGGCTTTGACATTTTCGATGGTGTCGGAACCTTCAACTTCTAGGGTAATGGTTTT 148213 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCATGGCTTATAA 138623 |||||| | ||||| ||||| || ||||| | ||| || Sbjct 148212 ACCAGTTAATGTTTTAACAAAGATTTGCATTGTTTAAAA 148174 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 || ||||| | | |||| || ||||| |||||||| || | |||||| || || Sbjct 148848 ACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCT 148789 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||||| | || || | |||||||| || || |||||||||||||| || Sbjct 148788 AATTGTTTACCGGCGAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTGTC-TTG 148730 Query 138526 ATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 | | || | |||| | ||| | |||||||| || || || | || | || || Sbjct 148729 AATCTTAGCCTTTACGTTTTCAATGGTGTCGGAACCTTCAACTTCAAGGGTAATGGTCTT 148670 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| | || || |||||||| ||||| Sbjct 148669 ACCAGTTAAGGTCTTAACAAAAATTTGCAT 148640 >seq12 Length=1224149 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||| | | |||| || ||||| || ||||| || | ||||| ||| || Sbjct 427399 ACTAAATGGAGGGTTGATTCTTTTTGGATATTGTAATCAGAGAGGGTACGACCGTCTTCT 427340 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||||| | |||| || | ||||| || || || |||||||||||||| | Sbjct 427339 AATTGTTTACCGGCAAAGATAAGTCTTTGTTGATCGGGTGGGATACCTTCTTTGTCTTGG 427280 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 ||||| || | | ||| | ||| || | || || || | || | || ||| Sbjct 427279 ATTTTGGCCTTGACATTTTCGATGGTATCTGAACCTTCAACTTCTAAGGTAATGGTCTTA 427220 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | |||||| || ||||||||||| Sbjct 427219 CCAGTTAAAGTTTTAACGAAAATCTGCAT 427191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262065022880