Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq33 111 2e-19 >seq33 Length=884058 Score = 111 bits (122), Expect = 2e-19 Identities = 1085/1733 (63%), Gaps = 91/1733 (5%) Strand=Plus/Minus Query 115687 TCCGCCGCCATATCAATCACATC-CTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTT 115745 || || ||||||||||||| | ||| | || || ||||| || || |||| || | Sbjct 111979 TCAGCAGCCATATCAATCAAGGCTCTTTGT-TTAATCTCCCAAACTGTCTTGTAAAGTTG 111921 Query 115746 CTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACC---TGCCTTGACCAT 115802 || | ||| ||||| || || |||||||| | ||| |||| ||| | | | | Sbjct 111920 TTTCAAATCCTCTGGAATCTCTGGAATATTTTGAACAGAACCACGGTGTGCTATAATCTT 111861 Query 115803 GAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTT 115862 | | |||| ||| ||||||| || |||| || | | ||||| | | ||||| Sbjct 111860 G---TTTTTCAAGTCCATTGACCACAGTCCAAGCTCCATAAGATCAGAAAGCAATTGCTT 111804 Query 115863 ATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGG 115922 ||| | || ||| ||||| || | | | ||| ||| ||||| | |||||||| Sbjct 111803 ATTAATAATTGTAAATTCACCTGCTAAGACTCTTCTGGAATATATGTTACTAGTGTATGG 111744 Query 115923 CTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCAT 115982 ||||| |||||||||||| || ||||| ||||||||||||||||| || || || Sbjct 111743 TTCAAAAGCCTCATTGTTACCTAAAATTTGACTGGTGGAGGCTGTGGGCATTGGGGCTAT 111684 Query 115983 GAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAG-GGCGTCCCAGTCGT 116041 | ||| ||| | ||||| || ||||||||| | ||| | || Sbjct 111683 TAAAAGTGAGTTTCTAAGACCGTGTTTGGCGATATCTTCCTTGAGTTGTTTCCAATTCCA 111624 Query 116042 AGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCG 116101 | | || | | | | |||||||||| | ||||| |||||||| ||||| | Sbjct 111623 ACGATCGGTTGGAGTGACAC-CCCACATATCGTATTGGAGTATACCTTGACTTGCTGGAG 111565 Query 116102 ATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGA 116158 | || | |||| ||| || || || | || | || | ||| ||| | | Sbjct 111564 AACCTTGGAATGATGAATAGGGTCCATCCTTATGAGCGAGTTCTACTGAG-GCGCTT--A 111508 Query 116159 GGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA--TTGCCTTGGCCTCGTCGGA 116216 ||||| || || ||||| |||| | ||||| || || ||| || ||| Sbjct 111507 AAGCTGCAAAGTAGATAGTCTCGGAAATCTCAATATTCAATTTAGCTGCACCT-GT-GGA 111450 Query 116217 ATCAAACGCGAGACG--GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 116274 ||||| | ||||| | | || || ||||| || |||||||| | ||| | ||| Sbjct 111449 TTCAAAAGGTAGACGAAGGGCTAA--GAAAACATCAGCAAGACCTTGAATACCAATACCA 111392 Query 116275 ATTGGGCGATGTCTCA---TATTAGACTTTCGAGCGGTCT-CCACGGGATAAAAATTCCT 116330 ||||| | || | | | ||| ||| ||| ||| || |||||| |||| || Sbjct 111391 ATTGGTCTGTGACGGAGGTTGCTAGTCTT---AGC-TTCTGGGACTGGATAATAATTTCT 111336 Query 116331 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC--ATGAAGC----TT 116384 ||| |||| | | || |||||| | || | || |||||| | ||| || |||| | Sbjct 111335 ATCAATAATCTTGTTGAGATTTCTAGTTATAATCTTTGTAACTTCATATAAAGCCTGATG 111276 Query 116385 TTCGTAATCAAA-----------ACTGCGAGTCT----------------CTTCATTGAC 116417 || | ||||| | | || ||| | || | | Sbjct 111275 ATCAAATTCAAAGGCTTTCTTATAATAAGATTCTGGATTGGTGTTAGGAACCTCTCTCAA 111216 Query 116418 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 116477 | |||| || | || || || || || ||||| || | | || || | ||||| Sbjct 111215 AAACTTTGGTAATGCAATAGAGGCAAGGTTACAAACTGCGACTTCCTCTGGAGATGTGTA 111156 Query 116478 CTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 116537 | ||||| || ||||||||||| || |||||| |||||||||||||||||||| Sbjct 111155 TTGAATAATCTCAGTACACAAATTGGATGATGAAATGGTACCCAAGTTCTTTTGATTTGA 111096 Query 116538 CTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTT 116597 || ||||| ||||| |||||||| ||||| || || || || || |||| || | Sbjct 111095 TTTCTCATTACAAGCATCTTTGTAGAGAATATAAGGTGTACCAGTTTCAATTTGAGATTC 111036 Query 116598 GAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCT---C 116654 | |||||| ||| | ||| || ||| || || || |||| Sbjct 111035 CACAATAGCAAACCACAAATCTTGAGCCTTAACA----ACTTTTCTAGCTAATCCTGGAG 110980 Query 116655 CTCGTAC---TTTGTG-TAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCT 116709 | || | |||| | || || || || || ||| || ||||| ||| ||| Sbjct 110979 TTTGTTCATATTTGAGATAAAGTTTTCTGAATTCCTC-TCCATGGCACTCTGCGAGACCT 110921 Query 116710 GGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAG 116769 || |||| || ||||| ||||| ||||| | || | ||| || | ||| ||| Sbjct 110920 GGGGCCTCATTAGGACAAAAGAGGGACCAATCTTCATTTCCAGGAACACGTTCCATAAAG 110861 Query 116770 AGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 116829 || || ||||| || || |||| | || ||| ||| ||||| | || ||| Sbjct 110860 AGATCACAAATCCAAAGGGCATAGAATAAGTCACGAGCACGAATCTCTTCCTTACCATGA 110801 Query 116830 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 116889 || | ||||| || || | || ||| |||||||| || || | ||| || || Sbjct 110800 TTTTTCTTTAGATCCAAGAACTCAAAGACATCAGCGTGCCATGGCTCTAAGTATACTGCA 110741 Query 116890 ATTGACCCCTTGC---GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACG 116946 | | || || | || || | |||| |||||| | || || |||||||||| Sbjct 110740 AAAGCACCTTTTCTCTTACCGCCTCCTTGGTCTACATAACGAGCAGTGTCGTTAAATACA 110681 Query 116947 CGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTG 117006 || | |||||| | | ||||| || || || || || || ||| || | Sbjct 110680 CGTAACATTGGTACTAAACCATTGGAAGTTCCGTTAGTTCCACGGATATAGGATTGAGCA 110621 Query 117007 GCTCTGACATCGTG-GATGTGC-ATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGC 117064 || | || ||| || || ||| |||||||| || || || | || || ||||| Sbjct 110620 GCAC-GA-ATCTTGTGAACTGCAATACCAATTCCACCAGCAGATTTACTAATCAATGCGC 110563 Query 117065 ACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTT-ATTTGCGATGAGGAAG 117123 | | | | | | ||||||| || || || || || | || ||||| | | ||| Sbjct 110562 ATTGTTTCAAAGTATCGTAGATACCGTCAATGGAATCCTCTTTCATTTG-AACCAAGAAA 110504 Query 117124 CAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATG 117183 || ||||| || || |||||||||||| ||||| | || || || || || | Sbjct 110503 CAAGATGACATCTGAGGGAATGGTGTACCAGCATTGAACAATGTAGGAGTAGCATGAGTA 110444 Query 117184 AACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTG 117242 |||| || | ||| | ||| || || ||||| || ||| | | ||| || || Sbjct 110443 AACA-ACTTCATGGAGAGCTTTTCATAAGTCTCAAAAGCAGCGTTCAAGTCAGTTCCATG 110385 Query 117243 AATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAG 117302 ||||| || ||||| | ||| ||||| | ||| ||| |||||| | |||||||| || Sbjct 110384 TATACCAATAGAGACTCTCATCAACATATGTTGAGGTCTTTCCACAATGATACCATTGAT 110325 Query 117303 CCTCTGGAGGTA-ACTCTTCTCCAAGGTCTTGAGACCAAAATAGCCAAAGTCA 117354 | || | || |||| ||||| ||||| | |||||| | || ||||| Sbjct 110324 ACGTTGCAAATATGATCTT-TCCAAAGTCTTAAAACCAAAGAAATCATAGTCA 110273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506785882640