Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq30 111 4e-19 seq27 109 1e-18 seq38 104 6e-17 >seq30 Length=714265 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 || |||||| || || | |||||||| || || ||||||| |||||||||| | ||| Sbjct 356313 TCTAAGTCTTAGAACTAAATGGAGAGTTGATTCTTTTTGGATATTGTAGTCAGAAAGAGT 356254 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||||| || || || || || |||||||| || ||||| || || || Sbjct 356253 ACGACCATCTTCCAATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCGGGTGGGATACC 356194 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 |||| || || ||||| ||| || || | || || | |||||| ||||| Sbjct 356193 TTCTTTATCTTGGATCTTGGTCTTAACATTCTCTATAGTATCAGAACCTTCTACCTCCAA 356134 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || | |||||| ||||||||||| Sbjct 356133 GGTAATTGTTTTACCTGTCAAAGTTTTAACAAAAATTTG 356095 Score = 107 bits (118), Expect = 5e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 || |||||| || || | ||||| || || || ||||||| ||||| |||| | ||| Sbjct 370265 TCTAAGTCTGAGTACTAAATGGAGGGTAGATTCTTTTTGGATATTGTAATCAGAGAGAGT 370206 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | || ||||||| || || ||||||||||| | ||| || || || || || || Sbjct 370205 ACGACCGTCTTCCAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCGGGTGGGATACC 370146 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 |||| || || || || ||| ||| ||||| ||| |||| ||| || || || Sbjct 370145 TTCTTTGTCTTGGATTTTGGCCTTGACGTTTTCGATGGTATCTGAACCTTCGACTTCTAA 370086 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || | |||||| ||||| ||||| Sbjct 370085 GGTGATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTG 370047 Score = 91.5 bits (100), Expect = 3e-13 Identities = 153/220 (70%), Gaps = 1/220 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 || |||||| || || | |||||||| || |||||||| | |||||||||| | ||| Sbjct 356542 TCTAAGTCTGAGAACTAAATGGAGAGTTGATTCCTTTTGAATATTGTAGTCAGAGAGAGT 356483 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||||| || || || || || || || | || || || || || || Sbjct 356482 ACGACCATCTTCCAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCGGGTGGGATACC 356423 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 |||| || |||||||| ||| || || | || |||| | ||| || ||||| Sbjct 356422 TTCTTTATCTTGAATCTTGGTCTTGACATTCTCAATAGTATCTGATCCTTCAACTTCCAA 356363 Query 199588 CGTGATCG-TCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || | | ||||| || | ||||| ||||||||||| Sbjct 356362 GGTAATTGGTTTTACCAGTCAAGGTTTTGACAAAAATTTG 356323 >seq27 Length=1864556 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||||| || || || ||||||| |||||| |||| | ||| | || Sbjct 1617949 TCTGAGTACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACC 1617890 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | || || |||||||| ||||| | || ||||| || || |||||| Sbjct 1617889 ATCTTCTAATTGTTTACCGGCGAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTCTTT 1617830 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||| || ||| ||| ||| | |||||| | |||||| || || || || Sbjct 1617829 GTCTTGAATTTTAGCCTTTACGTTTTCAATGGTGTCGGAACCTTCTACTTCTAAGGTAAT 1617770 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | |||||| ||||||||||| Sbjct 1617769 GGTTTTACCAGTCAAAGTTTTAACAAAAATTTG 1617737 >seq38 Length=878590 Score = 104 bits (114), Expect = 6e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| || || | ||||| || || || ||||||| |||||| |||| | ||| | Sbjct 148857 AGTCTGAGTACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGA 148798 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| | || || |||||||| ||||| | || ||||| || || |||||| Sbjct 148797 CCATCTTCTAATTGTTTACCGGCGAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTCT 148738 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || |||||||| ||| ||| ||| | |||||| | ||| || || | || Sbjct 148737 TTGTCTTGAATCTTAGCCTTTACGTTTTCAATGGTGTCGGAACCTTCAACTTCAAGGGTA 148678 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || | || || ||||||||||| Sbjct 148677 ATGGTCTTACCAGTTAAGGTCTTAACAAAAATTTG 148643 Score = 95.1 bits (104), Expect = 3e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| || || | |||||||| || || ||||||| |||||| |||| | ||| | Sbjct 148629 AGTCTGAGTACCAAATGGAGAGTTGATTCTTTTTGGATGTTGTAATCAGAGAGAGTACGA 148570 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| | || || ||||| ||||| | ||| || ||||| || || |||||| Sbjct 148569 CCATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGGTCGGGTGGGATACCTTCT 148510 Query 199532 CGCTCCTGAATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 || || || ||| |||| || ||||| ||| || | ||| || || | || Sbjct 148509 TTATCTTGGAT-TTTAGCTTTGACATTTTCGATGGTATCAGAACCTTCAACTTCAAGGGT 148451 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || | || || ||||||||||| Sbjct 148450 AATGGTCTTACCAGTCAAGGTCTTAACAAAAATTTG 148415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920784333618