Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq30 100 2e-16 seq27 95.1 8e-15 seq31 89.7 4e-13 >seq30 Length=714265 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567 ||||| ||||| | || ||||||||| ||||| ||||| | | | || | || Sbjct 370255 AGTACTAAATGGAGGGTAGATTCTTTTTGGATATTGTAATCAGAGAGAGTACGACCGTCT 370196 Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627 ||||||||||| ||| | || |||||||| || ||||| | || | ||||||||||| Sbjct 370195 TCCAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCGGGTGGGATACCTTCTTTGTCT 370136 Query 39628 CATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTT 39687 ||||| || | | | | || |||| | ||| || || || || || ||| Sbjct 370135 TGGATTTTGGCCTTGACGTTTTCGATGGTATCTGAACCTTCGACTTCTAAGGTGATGGTT 370076 Query 39688 TTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 ||||| ||||||||||| || ||||| |||||| Sbjct 370075 TTACCAGTTAAAGTTTTAACAAAGATTTGCATG 370043 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567 || || ||||| | ||| ||||||||| ||||| || || | | | || |||| Sbjct 356303 AGAACTAAATGGAGAGTTGATTCTTTTTGGATATTGTAGTCAGAAAGAGTACGACCATCT 356244 Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627 ||||||||||| || ||||||| | ||| || || || | || | |||||||| || Sbjct 356243 TCCAATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCGGGTGGGATACCTTCTTTATCT 356184 Query 39628 CATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTT 39687 || || |||| || ||| || || | | ||| || ||||| ||||||||| Sbjct 356183 TGGATCTTGGTCTTAACATTCTCTATAGTATCAGAACCTTCTACCTCCAAGGTAATTGTT 356124 Query 39688 TTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| || |||||||| || || || ||||| Sbjct 356123 TTACCTGTCAAAGTTTTAACAAAAATTTGCAT 356092 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567 ||||| ||||| | ||| ||||||||| ||||| || || | ||| || |||| Sbjct 356760 AGTACTAAATGGAGAGTAGATTCTTTTTGGATATTGTAGTCAGATAAAGTACGACCATCT 356701 Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627 ||||||||||| || ||||||| | | || || || | || | |||||||| || Sbjct 356700 TCCAATTGTTTACCAGCAAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTATCT 356641 Query 39628 CATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTT 39687 || || |||| || | | || |||| | ||| || ||||| ||||| ||| Sbjct 356640 TGAATCTTGGTCTTAACATTCTCAATAGTATCTGATCCTTCAACTTCCAAGGTAATGGTT 356581 Query 39688 TTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| || | ||| ||||| ||||| ||||| Sbjct 356580 TTACCTGTAAGAGTCTTTACAAAGATTTGCAT 356549 >seq27 Length=1864556 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567 ||||| ||||| || || ||||||||| || || ||||| | | | || |||| Sbjct 1617489 AGTACTAAATGTAATGTTGATTCTTTTTGAATGTTGTAATCAGAGAGAGTACGACCATCT 1617430 Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627 || |||||||| ||| |||| ||||| | || ||||| | || | |||||||| || Sbjct 1617429 TCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGATCGGGTGGAATACCTTCTTTATCT 1617370 Query 39628 CATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTT 39687 ||||| ||| | | | | ||||| | | ||| || || || ||||| ||| Sbjct 1617369 TGAATTTTGGCTTTGACATTTTCAATGGTGTCGGAACCTTCGACTTCTAAGGTAATAGTT 1617310 Query 39688 TTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| ||||||||||| || || || ||||| Sbjct 1617309 TTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1617278 >seq31 Length=145395 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567 || || ||||| | ||| |||||||||||||||||| || | | | || |||| Sbjct 8284 AGAACTAAATGGAGAGTTGATTCTTTTTGTATATTATAGTCAGAGAGAGTACGACCATCT 8343 Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627 ||||||||||| || ||||||| | | || || || | || | |||||||| || Sbjct 8344 TCCAATTGTTTACCAGCAAAAATAAGTCTTTGTTGGTCGGGTGGAATACCTTCTTTATCT 8403 Query 39628 CATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTT 39687 || || ||||| || | | ||||| | | ||| || || || |||||||| Sbjct 8404 TGGATCTTGGTTTTAACATTCTCAATGGTGTCAGAACCTTCAACTTCTAAGGTAATTGTC 8463 Query 39688 TTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| || || ||||| || ||||| ||||| Sbjct 8464 TTACCAGTCAATGTTTTGACAAAGATTTGCAT 8495 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/213 (69%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567 || || ||||| | ||| ||| |||||||| ||||| || | || || |||| Sbjct 8055 AGAACTAAATGGAGAGTTGATTCCTTTTGTATGTTATAGTCAGATAAGGTACGACCATCT 8114 Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627 ||||||||||| || ||||||| | ||| || ||||| | || | |||||||| || Sbjct 8115 TCCAATTGTTTACCAGCAAAAATGAGACGTTGTTGATCGGGTGGAATACCTTCTTTATCT 8174 Query 39628 CATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTT 39687 || ||| ||||| | | | || || | | ||| || |||||||||||||| Sbjct 8175 TGGATCTTTGTTTTAACATTTTCAATGGTATCAGAACCTTCAACTTCCAAAGTAATTGTC 8234 Query 39688 TTACCCGTTAAAGTTTTT-ACGAAGATCTGCAT 39719 ||||| || || |||||| || || | ||||| Sbjct 8235 TTACCAGTCAATGTTTTTGACAAAAAATTGCAT 8267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347369371387382