Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq33 156 5e-33 seq10 91.5 2e-13 >seq33 Length=884058 Score = 156 bits (172), Expect = 5e-33 Identities = 1076/1700 (63%), Gaps = 93/1700 (5%) Strand=Plus/Plus Query 111592 ATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATG 111651 ||||| || | |||||| || || | ||||| ||| | ||| | || ||||| |||| Sbjct 110329 ATGGTATCATTGTGGAAAGACCTCAACATATGTTGATGAGAGTCTCTATTGGTATACATG 110388 Query 111652 GGGAAGATATTGATTCTGTTTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATC 111710 | || | | ||| ||| ||||| || || ||| | ||| | || |||| | Sbjct 110389 GAACTGACTTGAACGCTGCTTTTGAGACTTATGAAAAGCTCTCCATGAAGT-TGTTTACT 110447 Query 111711 CACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTC 111770 || || || || || | ||||| |||||||||||| || || ||||| ||||||| Sbjct 110448 CATGCTACTCCTACATTGTTCAATGCTGGTACACCATTCCCTCAGATGTCATCTTGTTTC 110507 Query 111771 CTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCC 111830 | || || || |||||||| || | || || |||| ||| | | |||| || Sbjct 110508 TTGGTTCAAATGAAAGAGGATTCCATTGACGGTATCTACGATACTTTGAAACAATGCGCA 110567 Query 111831 CAAATCTCAAAGTGGGCTGGTGGTATCGGGAT-GCACATC-CATGATGTCAGAGCCAACA 111888 || || | |||||||| || || || ||| || || ||| || | || Sbjct 110568 TTGATTAGTAAATCTGCTGGTGGAATTGGTATTGCAGTTCACAAGAT-TC-GTGCTGCTC 110625 Query 111889 AGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTAT 111948 | || ||| | || || || || || ||||| | | |||||| | || |||| Sbjct 110626 AATCCTATATCCGTGGAACTAACGGAACTTCCAATGGTTTAGTACCAATGTTACGTGTAT 110685 Query 111949 TTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTC---GCAAGGGATCTATCGCAG 112005 |||||| ||| || || |||||| |||||| || || | || || || | |||| Sbjct 110686 TTAACGACACTGCTCGTTATGTAGACCAAGGAGGCGGTAAGAGAAAAGGTGCTTTTGCAG 110745 Query 112006 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 112065 | || | |||||||||||||| ||| || | |||||| | || | || || | Sbjct 110746 TATACTTAGAGCCATGGCACGCTGATGTCTTTGAGTTCTTGGATCTAAAGAAAAATCATG 110805 Query 112066 GTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTC 112124 || | || ||| || ||| || || | |||| || || |||||| |||||||| Sbjct 110806 GTAAGGAAGAGATTCG-TGCTCGTGACTTATTCTATGCCCTTTGGATTTGTGATCTCTTT 110864 Query 112125 ATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGT 112184 ||| | | ||| | | || ||||||| ||||||||||| | |||| || ||| Sbjct 110865 ATGGAACGTGTTCCTGGAAATGAAGATTGGTCCCTCTTTTGTCCTAATGAGGCCCCAGGT 110924 Query 112185 CTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTA-CACAAAGTACGAGGAAGAAA 112242 ||| | || |||| ||| ||||| || | || || | |||| | ||| ||| Sbjct 110925 CTCGCAGAGTGCCATGGA-GAGGAATTCAGAAAACTTTATCTCAAAT----ATGAACAAA 110979 Query 112243 GTC--GGGCGA-CT-GCGACGGTGCCA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGT 112296 || || | || | | | || | ||| ||| ||||| |||||| | | | Sbjct 110980 CTCCAGGATTAGCTAGAAAAGTTGTTAAGGCTCAAGATTTGTGGTTTGCTATTGTGGAAT 111039 Query 112297 CTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTA 112356 |||||| || ||||||||||| ||||| || |||||||| || ||||| | || | Sbjct 111040 CTCAAATTGAAACTGGTACACCTTATATTCTCTACAAAGATGCTTGTAATGAGAAATCAA 111099 Query 112357 ATCAAAAGAATTTGGGTGTGAT--CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATT 112414 |||||||||| |||||| || || | ||||| | ||||| || || | ||| Sbjct 111100 ATCAAAAGAACTTGGGTACCATTTCATCA--TCCAATTTGTGTACTGAGATTATTCAATA 111157 Query 112415 TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 112474 ||| ||| || || || |||||||| || || || || | || |||| | | Sbjct 111158 CACATCTCCAGAGGAAGTCGCAGTTTGTAACCTTGCCTCTATTGCATTACCAAAGTTTTT 111217 Query 112475 GG------------------ATCCAGAGACA------AAGACA---TTTGATTATGAAAA 112507 | ||||||| | |||| | ||||| | ||| | Sbjct 111218 GAGAGAGGTTCCTAACACCAATCCAGAATCTTATTATAAGAAAGCCTTTGAATTTGATCA 111277 Query 112508 AC------TCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAG 112561 | | | |||||||| || | | | || | ||| || |||| |||||||||| Sbjct 111278 TCAGGCTTTATATGAAGTTACAAAGATTATAACTAGAAATCTCAACAAGATTATTGATAG 111337 Query 112562 AAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATA---TGAGACACCGTCCAATTG 112617 ||||| ||| || || ||| ||| || ||| | | | ||| | ||||||| Sbjct 111338 AAATTATTATCCAGTCCCAGAA-GCT---AAGACTAGCAACCTCCGTCACAGACCAATTG 111393 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT---CTTTGTCGCCACGCATTTGATT 112674 || | ||| | |||||||| || ||||| ||| | ||| ||| | | ||||| | Sbjct 111394 GTATTGGTATTCAAGGTCTTGCTGATGTTTTCTTAGCCCTTCGTCTAC---CTTTTGAAT 111450 Query 112675 CCGACGAAGCGAAGGAAA--TCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732 || || | | | || || | ||| || | ||||| || || || ||| | Sbjct 111451 CC-AC-AGGTGCAGCTAAATTGAATATTGAGATTTCCGAGACTATCTACTTTGCAGCTTT 111508 Query 112733 TGAGGCGAGTTCGGAGT--TGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790 | ||| | | || | || | ||||| || ||| | | || | |||||| Sbjct 111509 --AAGCGCCTCAGTAGAACTCGCTCATAAGGATGGACCCTATTCATCATTCCAAGGTTCT 111566 Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC 112850 ||||| ||||| | || |||| |||||||||| | | | |||| | | Sbjct 111567 CCAGCAAGTCAAGGTATACTCCAATACGATATGTGGGGTG-TCACTCCAACCGATCGTTG 111625 Query 112851 GACTGGGACGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 112909 || | ||| | ||||||||| ||| | | |||||| | ||| ||||| || Sbjct 111626 GAATTGGAAACAACTCAAGGAAGATATCGCCAAACACGGTCTTAGAAACTCACTTTTAAT 111685 Query 112910 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 || |||||||| |||||||||||| ||||| || ||||| ||||| |||||||| Sbjct 111686 AGCCCCAATGCCCACAGCCTCCACCAGTCAAATTTTAGGTAACAATGAGGCTTTTGAACC 111745 Query 112970 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAA 113029 ||||| | ||||| ||| |||||| | | || || || ||| ||| | || || Sbjct 111746 ATACACTAGTAACATATATTCCAGAAGAGTCTTAGCAGGTGAATTTACAATTATTAATAA 111805 Query 113030 GCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCAT 113089 ||| | | ||| || | ||| |||| || ||||| | ||| |||| | || Sbjct 111806 GCAATTGCTTTCTGATCTTATGGAGCTTGGACTGTGGTCAATGGACTTGAAAAA---CAA 111862 Query 113090 GGTGAAAGC---GGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAA 113146 | | | ||| ||||||| ||||||||||| || |||||||| || | || | Sbjct 111863 GATTATAGCACACCGTGGTTCTGTTCAAAATATTCCAGAGATTCCAGAGGATTTGAAACA 111922 Query 113147 GTTGTACCGCACAGTTTGGGAAATCAAGATGAAG-GATGTCATTGACATGGCCGCAGATC 113205 | ||| ||||||||||| || || | ||| | | ||||| ||||| || || Sbjct 111923 ACTTTACAAGACAGTTTGGGAGATTAA-ACAAAGAGCCTTGATTGATATGGCTGCTGACA 111981 Query 113206 GTGGTCGCTTCATTGATCAA 113225 | ||| || ||||| ||| Sbjct 111982 GAGGTGCTTTTATTGACCAA 112001 >seq10 Length=701017 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/122 (78%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 23047 AACACTTCCAGTTCCTATCGCAATTGAGACAACTCACAAAAGTTGTCATTGGTTCATCCG 23106 || ||||||| || || ||||||| ||| | ||||||||||||||||||||||| | Sbjct 152807 AAAACTTCCATTTGTGATTGCAATTGGTACATGTTACAAAAGTTGTCATTGGTTCATCTG 152866 Query 23107 CAGACCGAGTTTGAAGTTGATAATAGGT-TGTTTTCTTTGATTTACAGCGCGCACATGTG 23165 | || |||||||| | ||| ||||| | ||||||||| |||||| || ||||| || Sbjct 152867 CGGAACGAGTTTGCATTTGGTAATATTTACATTTTCTTTG-TTTACAACGACCACATTTG 152925 Query 23166 AA 23167 || Sbjct 152926 AA 152927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741980998880