Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq33 154 2e-32 seq10 98.7 1e-15 >seq33 Length=884058 Score = 154 bits (170), Expect = 2e-32 Identities = 589/904 (65%), Gaps = 22/904 (2%) Strand=Plus/Minus Query 110329 GTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGA 110388 ||||||| | ||| || |||||||| ||||| |||| |||||||||||| ||| Sbjct 111160 GTGTATTGAATAATCTCAGTACACAAATTGGATGATGAAATGGTACCCAAGTTCTTTTGA 111101 Query 110389 TTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 || ||||| || || ||||| || ||||| || || || ||||||||||| | || Sbjct 111100 TTTGATTTCTCATTACAAGCATCTTTGTAGAGAATATAAGGTGTACCAGTTTCAATTTGA 111041 Query 110449 GACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCC 110508 || | | ||| || ||| | ||| || ||| | |||| | ||| Sbjct 111040 GATTCCACAATAGCAAACCACAAATCTTGAGCCTTAACAACTTTTCTAGCTAATCCTGGA 110981 Query 110509 ---TCCTCGTACTTGGTGTACAAGTCCTCA-AATTCCTGTCCGTA-CACATCAGAAAGAC 110563 | || || ||| || |||| || ||||||| ||| | ||| || | |||| Sbjct 110980 GTTTGTTCATATTTGAGATA-AAGTTTTCTGAATTCCTCTCCATGGCAC-TCTGCGAGAC 110923 Query 110564 CCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGA 110623 | |||| | ||||| ||||||||||||| | || | ||| | | ||| | Sbjct 110922 CTGGGGCCTCATTAGGACAAAAGAGGGACCAATCTTCATTTCCAGGAACACGTTCCATAA 110863 Query 110624 ACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTT 110683 | || ||| |||||| | || |||| | |||||| |||| |||||| | ||| | Sbjct 110862 AGAGATCACAAATCCAAAGGGCATAGAATAAGTCACGAGCACGAATCTCTTCCTTACCAT 110803 Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743 | || ||| ||||| || || | || ||| | ||||||||| || | || || | Sbjct 110802 GATTTTTCTTTAGATCCAAGAACTCAAAGACATCAGCGTGCCATGGCTCTAAGTATACTG 110743 Query 110744 CGATGGATCCCTTACGACGACC--CGCCT-GGTTAACATAGCGTGCTGTGGCATTGAAGA 110800 | | | || || | ||| | ||| ||| ||||| || || ||| | || || | Sbjct 110742 CAAAAGCACCTTTTCTCTTACCGCCTCCTTGGTCTACATAACGAGCAGTGTCGTTAAATA 110683 Query 110801 CCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTAT 110860 | | | ||| || | | |||| ||| || || || || | || ||| | | Sbjct 110682 CACGTAACATTGGTACTAAACCATTGGAAGTTCCGTTAGTTCCACGGATATAGGATTGAG 110623 Query 110861 TGGCACGAATGTCGTGGATATGCA-TACCAATACCACCCGCCCACTTACTAATTTGTGCA 110919 |||||||| | ||| | |||| ||||||| ||||| || | |||||||| ||| Sbjct 110622 CAGCACGAATCTTGTGAAC-TGCAATACCAATTCCACCAGCAGATTTACTAATCAATGCG 110564 Query 110920 CACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTG-TTGGCAATTAGAAA 110978 || | | | | ||| | || ||||| ||||| ||||| | || || | | ||||| Sbjct 110563 CATTGTTTCAAAGTATCGTAGATACCGTCAATGGAATCCTCTTTCATTTGAACCAAGAAA 110504 Query 110979 GCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAAT 111038 ||||| ||||||||||| || || || |||||||| | |||||| || |||||| | Sbjct 110503 -CAAGATGACATCTGAGGGAATGGTGTACCAGCATTGAACAATGTAGGAGTAGCATGAGT 110445 Query 111039 GAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACA--TCTTTACC 111095 |||| || | ||| | ||| | || || || | || || || || || | || Sbjct 110444 AAACA-ACTTCATGGAGAGCTTTTCATAAGTCTCAAAAGC--AGCGTTCAAGTCAGTTCC 110388 Query 111096 GTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATC 111155 || |||||||| | |||| ||| ||||||| |||||| |||| | | | |||| Sbjct 110387 ATGTATACCAATAGAGACTCTCATCAACATATGTTGAGGTCTTTCCACAATGATACCATT 110328 Query 111156 AACACGCTGAAGGTA-ACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAAT 111214 | ||| || | || |||| || | ||||| | ||||||| | || | || |||| Sbjct 110327 GATACGTTGCAAATATGATCTT-TCCAAAGTCTTAAAACCAAAGAAATCATAGTCAAAAT 110269 Query 111215 CACG 111218 |||| Sbjct 110268 CACG 110265 >seq10 Length=701017 Score = 98.7 bits (108), Expect = 1e-15 Identities = 196/285 (69%), Gaps = 9/285 (3%) Strand=Plus/Minus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTT--GGAG 11649 ||||||||||||||| | | ||| || | || | ||| | ||| ||||| ||| Sbjct 599519 GAAACCGTCCATTTCAACCAACAACTGATTCAATGTATTTTCTCTCTCGTCGTTATGGAA 599460 Query 11650 GGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATA 11709 | || |||| || |||| |||| ||||| |||||||||||||| |||| |||| Sbjct 599459 GCCA--CCACGTG---AACGTGATCTACCAACAGCATCAATCTCATCGATAAATATGATA 599405 Query 11710 CACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCT 11769 || ||| || | ||||| || || | ||| | ||||||| | ||||||||| Sbjct 599404 CAAGGTGCCGATGCTCTTGCCTCTTTAAACAATTCCCTTACACGCGATGGACCAACACCT 599345 Query 11770 ACGAACATCTCAACGAAGTTTGCGGCAGAACACTG-AATGAAGGGAACATTAGACTCACC 11828 || |||||||||| ||| | || | ||| | || || || | |||| | ||| || Sbjct 599344 ACAAACATCTCAATGAAATCTGATCCTGAA-ATTGTAAAAAATGCAACACCTGCCTCTCC 599286 Query 11829 AGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACC 11873 || | ||| ||| || || |||||||| ||||| || | ||| Sbjct 599285 TGCAGTTGCTTTAGCAAGCAGTGTCTTACCAGTACCTGGAGGACC 599241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975602441200