Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq33 118 1e-21 >seq33 Length=884058 Score = 118 bits (130), Expect = 1e-21 Identities = 434/670 (65%), Gaps = 11/670 (2%) Strand=Plus/Minus Query 106735 GAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTT 106794 ||||||||| |||| | ||||| || || ||||| | || | ||| || | Sbjct 110927 GAGACCTGGGGCCTCATTAGGACAAAAGAGGGACCAATCTTCATTTCCAGGAACACGTTC 110868 Query 106795 CATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTC 106854 ||| || || || |||||| |||| | || | || | | ||| |||||| | Sbjct 110867 CATAAAGAGATCACAAATCCAAAGGGCATAGAATAAGTCACGAGCACGAATCTCTTCCTT 110808 Query 106855 ACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATA 106914 ||| || || || || | |||||| | || ||| |||||||||||||| | || Sbjct 110807 ACCATGATTTTTCTTTAGATCCAAGAACTCAAAGACATCAGCGTGCCATGGCTCTAAGTA 110748 Query 106915 GACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTT 106971 ||||| | || || |||| || || |||| | |||||| || || ||| |||| Sbjct 110747 TACTGCAAAAGCACCTTTTCTCTTACCGCCTCCTTGGTCTACATAACGAGCAGTGTCGTT 110688 Query 106972 AAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGA 107031 |||||| || | |||||| | | ||||| || || || || || || ||| || Sbjct 110687 AAATACACGTAACATTGGTACTAAACCATTGGAAGTTCCGTTAGTTCCACGGATATAGGA 110628 Query 107032 TTTATTGGCTCTCACATCATG-GATGTGCA-TCCCAATACCCCCAGCCCACTTTGAGATT 107089 || | || | | || || || |||| | ||||| || ||||| | || || Sbjct 110627 TTGAGCAGCACGAA--TCTTGTGAACTGCAATACCAATTCCACCAGCAGATTTACTAATC 110570 Query 107090 TGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATA 107149 || || | | | ||| | |||||||||| || || ||||| || | | Sbjct 110569 AATGCGCATTGTTTCAAAGTATCGTAGATACCGTCAATGGAATCCTCTTTCATTTGAACC 110510 Query 107150 AGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCG 107209 | ||| ||| |||||||| || |||||||||||||||||| | || || || || Sbjct 110509 AAGAAACAAGATGACATCTGAGGGAATGGTGTACCAGCATTGAACAATGTAGGAGTAGCA 110450 Query 107210 TGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTC 107268 ||| | |||| || | ||| | ||| || || ||||| || ||| | | ||| Sbjct 110449 TGAGTAAACA-ACTTCATGGAGAGCTTTTCATAAGTCTCAAAAGCAGCGTTCAAGTCAGT 110391 Query 107269 CCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCC 107328 || || || || || | || | ||| ||||| | ||| ||| |||||| | ||| || Sbjct 110390 TCCATGTATACCAATAGAGACTCTCATCAACATATGTTGAGGTCTTTCCACAATGATACC 110331 Query 107329 ATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCAT 107387 || || ||||| | ||| | |||| || | || || | ||||||| || || | ||| Sbjct 110330 ATTGATACGTTGCAAATATGATCTT-TCCAAAGTCTTAAAACCAAAGAAATCATAGTCAA 110272 Query 107388 AGTCCCGCTT 107397 | || || || Sbjct 110271 AATCACGTTT 110262 Score = 113 bits (124), Expect = 5e-20 Identities = 247/366 (67%), Gaps = 8/366 (2%) Strand=Plus/Minus Query 105698 TGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAATGACATC-CTTCATCTTGATTTC 105756 |||||||| || ||| | | || ||||||||||| | | ||| | || || || Sbjct 112000 TGGTCAATAAAAGCACCTCTGTCAGCAGCCATATCAATCAAGGCTCTTTGT-TTAATCTC 111942 Query 105757 CCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGA 105816 ||| ||||| ||| || | || | ||| ||||| || |||| |||||||||| || Sbjct 111941 CCAAACTGTCTTGTAAAGTTGTTTCAAATCCTCTGGAATCTCTGGAATATTTTGAACAGA 111882 Query 105817 ACCCCCC---GCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTT 105873 ||| | || | | | || | |||| ||| | ||||| || |||| || | | Sbjct 111881 ACCACGGTGTGCTATAATCTTG---TTTTTCAAGTCCATTGACCACAGTCCAAGCTCCAT 111825 Query 105874 GAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAG 105933 |||||| | | ||||| || | ||| ||| || || || | | |||||| Sbjct 111824 AAGATCAGAAAGCAATTGCTTATTAATAATTGTAAATTCACCTGCTAAGACTCTTCTGGA 111765 Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 ||| ||||| | ||||| |||||||| ||||| ||||| || ||||| |||||| Sbjct 111764 ATATATGTTACTAGTGTATGGTTCAAAAGCCTCATTGTTACCTAAAATTTGACTGGTGGA 111705 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTC 106053 |||||| |||||||| || || ||||| ||| | |||||| | || ||| ||| Sbjct 111704 GGCTGTGGGCATTGGGGCTATTAAAAGTGAGTTTCTAAGACCGTGTTTGGCGATATCTTC 111645 Query 106054 CTTGAG 106059 |||||| Sbjct 111644 CTTGAG 111639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980401762960