Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq50 143 3e-29 >seq50 Length=1033787 Score = 143 bits (158), Expect = 3e-29 Identities = 452/692 (65%), Gaps = 10/692 (1%) Strand=Plus/Minus Query 154419 AAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGCAGTTGCACAATGAAATTAAAT 154478 |||||||| |||| || || |||| ||||| | || || ||||||||||| ||| Sbjct 90630 AAAGATTTAGGATTAACAACTGCTATGATTCCATTGGGTTCATGTACAATGAAATTGAAT 90571 Query 154479 GCAGCAGCAGAACTAATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACA 154538 || | || ||| | || || |||||| || |||| | | |||||| | || Sbjct 90570 GCCACTGCTGAAATGTATCCAGTATCATGGCCTGAATTTGGACAAATTCATCCATTTGCA 90511 Query 154539 CCTATGAT-ACAGACCATGGGTTATCAGAAAATTATAGATGACTTACAGAAATGGTTATG 154597 || || | ||| || || || | | || | ||| | | |||| ||||| Sbjct 90510 CC-ATCTTCACAAACTCAAGGCTACAAAGAGATGTTTGATTTCATTAGTAAATCATTATG 90452 Query 154598 TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTA 154657 ||| | || || |||||| | ||||||||||| || || || ||||| ||||| || Sbjct 90451 TGAGGTTACTGGATTTGATAATTGTTCATTACAACCAAATGCCGGTTCACAAGGTGAATA 90392 Query 154658 TGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGT 154717 | | || || | | ||| || || | | || ||| | ||||| || | Sbjct 90391 TACCGGTTTGATGGTTATCAGAGAGTATCTTAAATCCATTGGACAATCACAAAGAGATAT 90332 Query 154718 ATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGG 154775 |||||||| |||| ||| || ||||| ||||| || || ||||| |||| || Sbjct 90331 TTGTTTGATTCCAGTTAGT--GCTCATGGTACTAACCCAGCATCTGCTGCAATGGTTGGT 90274 Query 154776 ATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAG 154835 ||||||||||| | || ||||| | ||||||| | || | |||| | | Sbjct 90273 ATGAAAGTTGTTGTAGTTGCTTGTGACCAAAATGGTAATGTTGATAAAGCAGATTTGAAA 90214 Query 154836 AAGAAAGCAATCATGAATACATTTGAACTGTCA-TGTATTA-TGATTACATACCCATCTA 154893 ||||| | | |||||| ||| | || ||| ||||||| || ||||| | Sbjct 90213 TTAAAAGC--TGAGAAATACAAAGATACTCTAGCTGCTTTAATGATTACCTATCCATCAA 90156 Query 154894 CACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACAATGGTG 154953 | ||||||||||| ||| || |||| ||| | ||| ||||| | |||| | Sbjct 90155 CTCATGGTGTATTCGAAGAGGGTGCTAATGAGATGTGTGATATCATTCATCAATATGGAG 90096 Query 154954 GTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTG 155013 |||| || || | ||||| |||||| | ||||| || || || || ||| ||| Sbjct 90095 GTCAAGTTTACATGGATGGTGCAAATATGAATGCTCAAGTTGGTTTATGTCGTCCAGGTG 90036 Query 155014 AGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAG 155073 | |||||| ||||| || || | || | || || ||||||||||| |||||||||| Sbjct 90035 ACATTGGTGCTGATGTCTGCCACTTGAATCTCCACAAGACATTCTGTATCCCACATGGAG 89976 Query 155074 GTGGAGGTCCTGGCGTAGGTCCTATAGGTGTA 155105 |||| ||||| || | ||||| || ||||| Sbjct 89975 GTGGTGGTCCAGGTATGGGTCCAATTTGTGTA 89944 Score = 116 bits (128), Expect = 4e-21 Identities = 132/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 153253 GAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATAT 153312 |||| || | |||||||| | ||||| ||| | || |||||||| ||||||||||| | Sbjct 91844 GAAATATTTTAGAGAATCCAGGATGGTATACACCATATACTCCCTACCAAGCTGAGATCT 91785 Query 153313 CTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGAT 153372 | || || | || || | |||| |||| |||||| | || |||| | |||| | Sbjct 91784 CACAAGGTCGTTTAGAGTCACTATTGAATTTCCAAACTATGATTGCAGATTTGACAGCAC 91725 Query 153373 TACCAATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGC 153429 | ||||| || || ||||| || | |||||||||||||||||||| ||||| |||| Sbjct 91724 TTCCAATGGCCAATGCATCCTTACTCGATGAAGCAACTGCAGCAGCTGAAGCTATGC 91668 Score = 102 bits (112), Expect = 9e-17 Identities = 206/306 (67%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 153731 AGGTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGG 153790 |||||| ||||| |||||||||| | |||| | || || |||||| | ||| | || Sbjct 91366 AGGTGAATGGGGTGCTGATATTGCTTTGGGTAATTCCCAGAGATTTGGTGTACCTTTAGG 91307 Query 153791 ATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACC 153850 | ||| || || |||||||||||||||||||| | || | || | | | |||| Sbjct 91306 TTTTGGTGGACCACATGCTGCATTCTTTGCAACCTCTTACCAATACAGTCGTTTGTTACC 91247 Query 153851 TGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACT 153910 ||| |||||| | ||| || ||| || ||| |||| || | | || | Sbjct 91246 TGGAAGAATTATTGGTATCTCTAAAGACCGTCTAGGAGGACAAGCTTATCGTATGGCTTT 91187 Query 153911 ACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCA 153970 ||| ||| | || || || || | | || ||||| || ||||| || || |||| Sbjct 91186 ACAAACTCGTGAACAACACATTCGTCGTGAAAAAGCTACTTCAAACATATGTACTTCTCA 91127 Query 153971 GGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACTACA 154030 ||||| |||| |||||| ||| | | ||||| | |||||| ||| || | || || | Sbjct 91126 AGCACTTTTGGCAAATATGGCTGCAATGTATGCTGTATATCACGGTCCACAGGGTCTTAA 91067 Query 154031 TGCTAT 154036 ||||| Sbjct 91066 AGCTAT 91061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212409031360