Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq50 161 1e-34 >seq50 Length=1033787 Score = 161 bits (178), Expect = 1e-34 Identities = 456/692 (66%), Gaps = 10/692 (1%) Strand=Plus/Minus Query 159094 AAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAAC 159153 |||||||| |||| || || |||| ||||| | ||| ||||| |||||| | || Sbjct 90630 AAAGATTTAGGATTAACAACTGCTATGATTCCATTGGGTTCATGTACAATGAAATTGAAT 90571 Query 159154 GCAGCATCAGAACTGATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACA 159213 || | | ||| || || || |||||| || |||| | | |||||| | || Sbjct 90570 GCCACTGCTGAAATGTATCCAGTATCATGGCCTGAATTTGGACAAATTCATCCATTTGCA 90511 Query 159214 CCTATGAT-ACAGACCATGGGTTATCAAAAAATTATAGATGACTTACAGAAATGGTTATG 159272 || || | ||| || || || || | || | ||| | | |||| ||||| Sbjct 90510 CC-ATCTTCACAAACTCAAGGCTACAAAGAGATGTTTGATTTCATTAGTAAATCATTATG 90452 Query 159273 TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTA 159332 ||| | || || |||||| | ||||||||||| || || || ||||| ||||| || Sbjct 90451 TGAGGTTACTGGATTTGATAATTGTTCATTACAACCAAATGCCGGTTCACAAGGTGAATA 90392 Query 159333 TGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGT 159392 | | || || | | ||| || || | | || ||| | ||||| || | Sbjct 90391 TACCGGTTTGATGGTTATCAGAGAGTATCTTAAATCCATTGGACAATCACAAAGAGATAT 90332 Query 159393 ATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGG 159450 |||||||| |||| ||| || ||||| ||||| || ||||| || | |||| || Sbjct 90331 TTGTTTGATTCCAGTTAGT--GCTCATGGTACTAACCCAGCATCTGCTGCAATGGTTGGT 90274 Query 159451 ATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAG 159510 ||||||||||| | || ||||| | |||| || | || | |||| | | Sbjct 90273 ATGAAAGTTGTTGTAGTTGCTTGTGACCAAAATGGTAATGTTGATAAAGCAGATTTGAAA 90214 Query 159511 AAGAAAGCAATCATGAATACATTTGAACTGTCA-TGTATTA-TGATTACATATCCATCTA 159568 ||||| | | |||||| ||| | || ||| ||||||| |||||||| | Sbjct 90213 TTAAAAGC--TGAGAAATACAAAGATACTCTAGCTGCTTTAATGATTACCTATCCATCAA 90156 Query 159569 CACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAATGGTG 159628 | ||||||||||| ||| | |||| ||| | || ||||| | |||| | Sbjct 90155 CTCATGGTGTATTCGAAGAGGGTGCTAATGAGATGTGTGATATCATTCATCAATATGGAG 90096 Query 159629 GTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTG 159688 |||| || || | |||||||||||| | ||||| || || ||| || ||| ||| Sbjct 90095 GTCAAGTTTACATGGATGGTGCAAATATGAATGCTCAAGTTGGTTTATGTCGTCCAGGTG 90036 Query 159689 ACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAG 159748 || |||||| ||||| || || | || | || |||||||||||||| |||||||||| Sbjct 90035 ACATTGGTGCTGATGTCTGCCACTTGAATCTCCACAAGACATTCTGTATCCCACATGGAG 89976 Query 159749 GTGGAGGTCCTGGCGTAGGTCCTATTGGTGTA 159780 |||| ||||| || | ||||| ||| ||||| Sbjct 89975 GTGGTGGTCCAGGTATGGGTCCAATTTGTGTA 89944 Score = 116 bits (128), Expect = 4e-21 Identities = 132/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 157928 GAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATAT 157987 |||| || | |||||||| | ||||| ||| | || |||||||| ||||||||||| | Sbjct 91844 GAAATATTTTAGAGAATCCAGGATGGTATACACCATATACTCCCTACCAAGCTGAGATCT 91785 Query 157988 CTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGAC 158047 | || || | || || | |||| |||| |||||| | || |||| | |||| || Sbjct 91784 CACAAGGTCGTTTAGAGTCACTATTGAATTTCCAAACTATGATTGCAGATTTGACAGCAC 91725 Query 158048 TACCGATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGC 158104 | || || || || ||||| || | |||||||||||||||||||| ||||| |||| Sbjct 91724 TTCCAATGGCCAATGCATCCTTACTCGATGAAGCAACTGCAGCAGCTGAAGCTATGC 91668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050803065440