Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq36 152 6e-32 seq27 129 7e-25 >seq36 Length=2033623 Score = 152 bits (168), Expect = 6e-32 Identities = 211/295 (72%), Gaps = 3/295 (1%) Strand=Plus/Minus Query 37474 TTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATA 37533 ||||||| |||||||||||||| || || || |||||||| ||||| || ||||| | || Sbjct 729763 TTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTGGTA 729704 Query 37534 ATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTG 37593 |||||| || | | ||| | | |||| ||||||||||| || ||||| ||||| Sbjct 729703 TTTGAACTTCACTCATAAATTTAGTTGCTAGATTTTCATTAACAATACCATCTGAAGCTG 729644 Query 37594 CAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATTTGATAATTTTTTCC 37650 |||| || || | |||| || |||||| ||||| |||||| | |||| || Sbjct 729643 CAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTATTTTCCC 729584 Query 37651 AATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCAC 37710 | ||||| ||||| | | |||||||| || || | ||||| || || ||| Sbjct 729583 ATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCTGCTT 729524 Query 37711 GTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATCTATC 37765 |||||||||| |||| || || | || |||||||||| ||||||||||| Sbjct 729523 GTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATCTATC 729469 Score = 132 bits (146), Expect = 6e-26 Identities = 213/300 (71%), Gaps = 12/300 (4%) Strand=Plus/Minus Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232 ||||| ||||| | |||||||| ||||||||| | ||| ||||||||||| || || || Sbjct 730120 AAACAAGCAAAGTTACAATGTAGACCTTCATCACGACTAATCAATTCATTGGAGAATGTC 730061 Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAG 37292 || |||||||||||||||||||| || | |||||| || | ||| ||| || Sbjct 730060 AAACCTGGCATTAAACCTCTTTTCTTTAGCCAAAAGATGGAACAGAAACTACCACTGAAA 730001 Query 37293 AAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCA 37352 || ||||||||||| ||||||||||| || | | | | | | || ||| ||| ||| Sbjct 730000 AAGATACCTTCAACAGCTGCAAATGCCACCA-ATCTCT-CTGCAA-ATGATCTAGAAT-- 729946 Query 37353 GAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCT 37412 |||||| | | ||| |||||||| ||| |||||| ||| ||||| || || Sbjct 729945 -TGATCCATCTCAAGGCCCATTCTGCCTTCTTTTTCACACATGGAATAGTTTCTATAGCA 729887 Query 37413 TTTAAGAGAAAGtt---tttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTA 37469 || || || || ||||| ||| | | | ||||| |||||||||| | |||| Sbjct 729886 TT---GAATAATTTAGCTTTTTGTTCTGGGTTTTTAATATATGTATCAATTAAAAGACTA 729830 >seq27 Length=1864556 Score = 129 bits (142), Expect = 7e-25 Identities = 208/298 (70%), Gaps = 6/298 (2%) Strand=Plus/Minus Query 78230 TGATGTTATTGGAATTGATGAAGGTCAATTTTTTAATGATATAGTGGAATTTTCTGAAAA 78289 |||||| ||||| ||||| |||||||| ||||| ||| | ||||| || ||| | Sbjct 792288 TGATGTAATTGGCATTGACGAAGGTCAGTTTTTCCCAGATGTTGTGGATTTCAGTGAGGA 792229 Query 78290 TATGGCAAATAAAGGAAAAATTGTTATTGTTTCGGCATTAGATGCTACATATCAAAGAAA 78349 | | || |||||||| |||||||| || || | || |||||| |||| ||||||||| Sbjct 792228 TCTTGCCAATAAAGGTAAAATTGTAATCATTGCAGCTCTAGATGGAACATTTCAAAGAAA 792169 Query 78350 AACATTTGGTAATATTCTAAATTTAATTCCATTATCTGAAAAGGTAATAAAATTAAATGC 78409 | |||| | ||| ||||| | ||| | | || | | | ||| | | ||| Sbjct 792168 ACCATTCCCAACCATTTTAAATCTCATTGGTAAAGCAGAGGATATTACCAAACTGACTGC 792109 Query 78410 TATATGTAAAATATGTTTTAATGATGCTGCATTTACAAAAAGA---TTATGTGACGATAC 78466 | |||| | |||||||||||||||||||| |||||||| | | ||| || | Sbjct 792108 AGTTTGTATGGTTTGTTTTAATGATGCTGCATTCTCAAAAAGAACCGTTTCTGATGAATC 792049 Query 78467 TAAAATTGAACTAATTGGTGGAGAGGATAAATATAGTTCTGTTTGTAGAAAATGTTAT 78524 | | ||| | |||||||| |||||||||| ||| |||||||||| |||||| Sbjct 792048 T---GTAGAATTGATTGGTGGTACTGATAAATATATTTCAGTTTGTAGAAGTTGTTAT 791994 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 34886 TTAATTACGATAATACCAATATTACCTCTGTAATCCCTATCTATAACACCTCCACCTATA 34945 |||| || || | ||||| |||||||||||| || ||| || |||||| |||| | | Sbjct 788604 TTAAATAAAATGACACCAACATTACCTCTGTAGTCAAAATCAATGACACCTGCACCGACA 788663 Query 34946 TCAATGTATTTATTCAAAGACAAACCTGATCTTGCAGCTATCCTACCATAACATCCTTCT 35005 ||||| | || ||| | | ||| || ||||||| ||||| || ||||| |||||| Sbjct 788664 TCAATTGAATTCTTCCATGCCAATCCAGATCTTGGAGCTACTCTTCCATAGGTACCTTCT 788723 Query 35006 GGTATATCAAACATAATATCTGT 35028 || ||| ||| |||||| || Sbjct 788724 GGAATAGCAATTTGAATATCAGT 788746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316400186160