Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq33 187 1e-42 >seq33 Length=884058 Score = 187 bits (206), Expect = 1e-42 Identities = 323/464 (70%), Gaps = 8/464 (2%) Strand=Plus/Minus Query 25931 TCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCT 25990 |||||||| | ||| |||||| | ||||| ||||| || | || | || ||||| Sbjct 110869 TCCATAAAGAGATCACAAATCCAAAGGGCATAGAATAAGTCACGAGCACGAATCTCTTCC 110810 Query 25991 TTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAA 26050 || || ||||| || |||||||| ||||| ||||| | ||| | ||||||||| ||||| Sbjct 110809 TTACCATGATTTTTCTTTAGATCCAAGAACTCAAAGACATCAGCGTGCCATGGCTCTAAG 110750 Query 26051 TAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCA 26110 || | |||||| ||||||||| || || || ||||| ||||| || | ||||| || Sbjct 110749 TATACTGCAAAAGCACCTTTTCTCTTACCGCCTCCTTGGTCTACATAACGAGCAGTGTCG 110690 Query 26111 TTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTG 26170 || || || |||||||| ||||| ||| | ||| |||||| || | | | || | | Sbjct 110689 TTAAATACACGTAACATTGGTACTAAACCATTGGAAGTTCCGTTAGTTCCACGGATATAG 110630 Query 26171 GATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATA 26230 ||| | | | ||| | |||| | |||||| ||||||||||| |||| ||| Sbjct 110629 GATTGAGCAGCACGAATCTTGTGAACTGCAATACCAATTCCACCAGCAGATTTACTAATC 110570 Query 26231 GCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAAT 26290 ||| || | | | |||||| | || || | ||| ||| |||||||| | Sbjct 110569 AATGCGCATTGTTTCAAAGTATCGTAGATACCGTCAATGGAATCCTCTTTCATTTGAACC 110510 Query 26291 AAAAAACAAGAAGATAATTGCG--AATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAG 26348 || |||||||| || | || | |||| ||| || | ||| || ||||| || |||| Sbjct 110509 AAGAAACAAGATGACATCTGAGGGAATGG--TGTACCAGCATTGAACAATGTAGGAGTAG 110452 Query 26349 CATGAGTATAATATCCTTCACTCAAAGCTGT--ATAAGTTTCAA 26390 |||||||| || | ||||| | |||| | |||||| |||| Sbjct 110451 CATGAGTA-AACA-ACTTCATGGAGAGCTTTTCATAAGTCTCAA 110410 Score = 95.1 bits (104), Expect = 6e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 24982 AAGATCTCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTAT 25041 |||||| || ||| || ||||| || || ||||||| || | || |||||||| Sbjct 111824 AAGATCAGAAAGCAATTGCTTATTAATAATTGTAAATTCACCTGCTAAGACTCTTCTGGA 111765 Query 25042 TGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGA 25101 ||| ||| |||| ||||||||||| ||||| || ||||| |||||| || || Sbjct 111764 ATATATGTTACTAGTGTATGGTTCAAAAGCCTCATTGTTACCTAAAATTTGACTGGTGGA 111705 Query 25102 TGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTG 25161 ||||| |||||| |||||||| || || ||||| | ||| | ||| | || |||| Sbjct 111704 GGCTGTGGGCATTGGGGCTATTAAAAGTGAGTTTCTAAGACCGTGTTTGGCGATATCTTC 111645 Query 25162 TTTTAATTTATCCCAAT 25178 || | || | ||||| Sbjct 111644 CTTGAGTTGTTTCCAAT 111628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039833468050