Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq50 188 8e-43 >seq50 Length=1033787 Score = 188 bits (208), Expect = 8e-43 Identities = 462/692 (67%), Gaps = 10/692 (1%) Strand=Plus/Plus Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241 ||||| ||| ||||| | || ||||| |||||||||||||| |||||||||||||| || Sbjct 89944 TACACAAATTGGACCCATACCTGGACCACCACCTCCATGTGGGATACAGAATGTCTTGTG 90003 Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301 | ||| | || || ||||| |||||| ||||| ||| || ||| || || || Sbjct 90004 GAGATTCAAGTGGCAGACATCAGCACCAATGTCACCTGGACGACATAAACCAACTTGAGC 90063 Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATAT 138361 ||| | |||||||||||| | || || ||||| |||| | ||||| ||| | ||| || Sbjct 90064 ATTCATATTTGCACCATCCATGTAAACTTGACCTCCATATTGATGAATGATATCACACAT 90123 Query 138362 CTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCA-TAATACA-T 138419 || | ||| |||||||||||||| |||||||| ||||||| ||| || Sbjct 90124 CTCATTAGCACCCTCTTCGAATACACCATGAGTTGATGGATAGGTAATCATTAAAGCAGC 90183 Query 138420 GAGAGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA 138479 ||||| |||||| | | ||||| | | |||| | || | || ||| Sbjct 90184 TAGAGTATCTTTGTATTTCTCA--GCTTTTAATTTCAAATCTGCTTTATCAACATTACCA 90241 Query 138480 TCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539 | | ||||| || | ||||||||||| || |||| | ||| || || ||| Sbjct 90242 TTTTGGTCACAAGCAACTACAACAACTTTCATACCAACCATTGCAGCAGATGCTGGGTTA 90301 Query 138540 GTTCCATGTGCTGACT--CTGGTATCAGACATACATTTCTTTTATCATCTCCTGATCCTT 138597 || ||||| || ||| |||| |||| ||| | || ||||| | ||| || Sbjct 90302 GTACCATGAGC--ACTAACTGGAATCAAACAAATATCTCTTTGTGATTGTCCAATGGATT 90359 Query 138598 GATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTT 138657 | |||| || ||| | | || || | ||| ||||| ||||| || || || |||| Sbjct 90360 TAAGATACTCTCTGATAACCATCAAACCGGTATATTCACCTTGTGAACCGGCATTTGGTT 90419 Query 138658 GTAATGATATAGAATCAAAACCTGTGATATCACATAACCATTTCTGTAAGTCATCTATTA 138717 ||||||| | |||||| || || | |||||||| |||| | | ||| | | Sbjct 90420 GTAATGAACAATTATCAAATCCAGTAACCTCACATAATGATTTACTAATGAAATCAAACA 90479 Query 138718 TCTTTTGATAACCCATGGTCTGT-ATCATAGGTGTATGTGGATGCACGTTGGCAAATTCT 138776 ||| || || || || ||| | || |||| | |||||| | | ||||||| Sbjct 90480 TCTCTTTGTAGCCTTGAGTTTGTGAAGAT-GGTGCAAATGGATGAATTTGTCCAAATTCA 90538 Query 138777 TCCCATGACACAGGCATCAGTTCTGCTGCTGCATTTAGTTTCATTGTGCAACTACCAAGT 138836 |||||| || || || ||| || | ||||| | ||||||||| || ||| | | Sbjct 90539 GGCCATGATACTGGATACATTTCAGCAGTGGCATTCAATTTCATTGTACATGAACCCAAT 90598 Query 138837 GGAACCATACCATTTACTAATGAGAAATCTTT 138868 |||| |||| || || |||| |||||||| Sbjct 90599 GGAATCATAGCAGTTGTTAATCCTAAATCTTT 90630 Score = 113 bits (124), Expect = 5e-20 Identities = 131/177 (74%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 139858 GCATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATC 139917 |||| || || |||||||||||||||||||| | || ||||| || || ||||| | | Sbjct 91668 GCATAGCTTCAGCTGCTGCAGTTGCTTCATCGAGTAAGGATGCATTGGCCATTGGAAGTG 91727 Query 139918 CTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATA 139977 |||| | |||| || | |||||| |||| |||| | || || | || || || | Sbjct 91728 CTGTCAAATCTGCAATCATAGTTTGGAAATTCAATAGTGACTCTAAACGACCTTGTGAGA 91787 Query 139978 TCTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTC 140034 |||||||||| |||||||| || | ||| ||||| | |||||||| | || |||| Sbjct 91788 TCTCAGCTTGGTAGGGAGTATATGGTGTATACCATCCTGGATTCTCTAAAATATTTC 91844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998009176080