Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq46 250 3e-61 >seq46 Length=277422 Score = 250 bits (276), Expect = 3e-61 Identities = 536/798 (67%), Gaps = 35/798 (4%) Strand=Plus/Minus Query 47752 GATTCCTCAACAAACTGACGGACAGAATATTGATTT-CCTGTGGCAATAACAAAATCATC 47810 |||| |||||||| |||| ||||| | | || || || ||||| ||||| || | Sbjct 48490 GATTTTTCAACAAATAGACGAACAGAGG-TAGTTTCACCAGTTGCAATGACAAAGTCTTG 48432 Query 47811 AGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCA 47870 |||| ||||||||| | |||||||||||| ||||| ||||| ||||| ||||| ||||| Sbjct 48431 TGGTTTTTCTTGTTGTAACATTAACCACATTGCCTCTACATAGTCTCTAGCATGACCCCA 48372 Query 47871 GTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATT-- 47928 ||||| |||||| | || || | ||| | | |||| ||| || | | Sbjct 48371 ATCACGTTGTGCATTGATGTTACCCAAATAGAGAGTATCTTTAGAACCAGTAGCAACTTT 48312 Query 47929 -GCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTC 47987 || ||| || || || || | ||||||||| ||| ||| | |||||| || || Sbjct 48311 AGCAACAAAT---CTAGTGATTTTTCTAGTTACAAAGGTTGGACCTCTTCTTGGTGACTC 48255 Query 47988 ATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTAC 48047 || || || | ||||| |||| || ||||| || | || | ||||| || Sbjct 48254 GTGGTTGAATAATATACCGTTACATGCGTACATGTTATAAGCCTCTCTGTAGTTTACAAC 48195 Query 48048 TATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGT 48107 ||||| || || | |||| ||||| |||| || |||||||| || ||||||||||| Sbjct 48194 AATCCAATAGGCAAATTGTTTGGCAACTGCATAGGGGGAACGTGGGTAAAAAGGTGTGGT 48135 Query 48108 CTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGAT 48167 || | || ||| ||||||| ||||| ||||| ||||| ||| || |||||||||| Sbjct 48134 TTCAGATTGAGGAATCTCTTGTACCTTTCCATAGAGTTCTGAGGTAGAGGCTTGATAGAA 48075 Query 48168 ACGAACCCTATCTTCCATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAGGGTGCCTAT 48227 ||| ||||||| | || |||| | || || || | | | || | Sbjct 48074 TTTAACTTTATCTTCTAAACCACATGAACGAATGGCATCGAGAATACGTAAACAACCAAG 48015 Query 48228 GGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGACTCTGTGC 48287 | ||| | | || || || ||| ||||| || || |||||| |||||| Sbjct 48014 ACCGTCTACATTGGCTGTGTATTCACTCATATCAAAACTGACTTTAACATGAGACTGTGC 47955 Query 48288 CCCAAGATTATAAATCTCATCTGGTTGAACCTGCTGAATAACCCTCACTAAATTTGTAGA 48347 || ||||||||||||||| ||| | || | ||| | | |||||||| || || Sbjct 47954 TCCGAGATTATAAATCTCAGTTGGGTTCACTTTGGAAATGATACCTACTAAATTGGTGGA 47895 Query 48348 GTCTGTTAAGTCTCCATAATGCAAT-----------TTTA-----AT--------TGATC 48383 ||||||||| || ||||| || ||| |||| || |||| Sbjct 47894 GTCTGTTAAATCACCATAGTGTAATATCATTTTTCCTTTACCTGTATGTCTGTCATGAT- 47836 Query 48384 ATAAATGTGATCAATTCTATGTGTATTAATTAAAGAAGCCCGACGGACAATACCATGAAC 48443 |||||||| ||||||||| ||||||| | | || | | | | |||||||||||| Sbjct 47835 ATAAATGT--TCAATTCTACTAGTATTAAATGATGATGATCTTCTAATAATACCATGAAC 47778 Query 48444 CTCATACCCCTTTTCAAGAAGAAGTTCTGCTAAGTATGAACCATCTTGTCCTGTAATACC 48503 | ||| || ||||| | |||| ||||| ||| ||||| ||||||||||| |||||||| Sbjct 47777 TTGATATCCTTTTTCTAATAGAAATTCTGTTAAATATGATCCATCTTGTCCAGTAATACC 47718 Query 48504 AGTGATTAAAGCAACTTT 48521 | ||||| || ||||| Sbjct 47717 TGAAATTAATGCTACTTT 47700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665493950791280