Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04]
54 sequences; 23,375,662 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq33 136 5e-27
>seq33
Length=884058
Score = 136 bits (150), Expect = 5e-27
Identities = 1106/1764 (63%), Gaps = 87/1764 (5%)
Strand=Plus/Plus
Query 75125 AAGCGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCA 75183
|| || || | ||| | || || ||||||| | || || | || |||| | ||| | ||
Sbjct 110262 AAACGTGATTTTGACTATGATTTCTTTGGTTTTAAGACTTTGGA-AAGATCATATTTGCA 110320
Query 75184 ACGGCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGG 75243
||| || |||| ||| | |||||| || || | ||||| ||| | ||| | || ||
Sbjct 110321 ACGTATCAATGGTATCATTGTGGAAAGACCTCAACATATGTTGATGAGAGTCTCTATTGG 110380
Query 75244 CATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTA 75302
|| || || ||| | | ||| || ||||| || || ||| | ||| | ||
Sbjct 110381 TATACATGGAACTGACTTGAACGCTGCTTTTGAGACTTATGAAAAGCTCTCCATGAAGT- 110439
Query 75303 TGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCA 75362
|||| | ||| || || || || | |||||||||||||||||| || ||||||||
Sbjct 110440 TGTTTACTCATGCTACTCCTACATTGTTCAATGCTGGTACACCATTCCCTCAGATGTCAT 110499
Query 75363 GTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGG 75422
||| ||| | | | || ||||| || || |||||||||| | ||| | |
Sbjct 110500 CTTGTTTCTTGGTTCAAATGAAAGAGGATTCCATTGACGGTATCTACGATACTTTGAAAC 110559
Query 75423 AGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGAT-GCACATC-CATGATGTGAG 75480
| || || || || | ||||| || ||||| || ||| || || ||| | |
Sbjct 110560 AATGCGCATTGATTAGTAAATCTGCTGGTGGAATTGGTATTGCAGTTCACAAGATTCGTG 110619
Query 75481 AGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCT 75540
| | |||| ||| || || || || || || ||||| | | |||||| |
Sbjct 110620 CTGC--TCAATCCTATATCCGTGGAACTAACGGAACTTCCAATGGTTTAGTACCAATGTT 110677
Query 75541 TCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTC---GCAAGGGGTC 75597
|| |||||||||| ||| || || |||||| | |||| || || | || || |
Sbjct 110678 ACGTGTATTTAACGACACTGCTCGTTATGTAGACCAAGGAGGCGGTAAGAGAAAAGGTGC 110737
Query 75598 CATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACT 75657
| || || ||||| || |||||||| || ||| || | |||||| | || ||
Sbjct 110738 TTTTGCAGTATACTTAGAGCCATGGCACGCTGATGTCTTTGAGTTCTTGGATCTAAAGAA 110797
Query 75658 CAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGA 75717
|| || ||| | |||||| ||| | | || | || | |||| |||||| ||
Sbjct 110798 AAATCATGGTAAGGAAGAGATTCGTGCTCGTGACTTATTCTATGCCCTTTGGATTTGTGA 110857
Query 75718 CCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGC 75777
|| || ||| | || ||| | || | ||||| || || ||||| | ||||
Sbjct 110858 TCTCTTTATGGAACGTGTTCCTGGAAATGAAGATTGGTCCCTCTTTTGTCCTAATGAGGC 110917
Query 75778 ACCAGGTCTCTCCGAC-GCGGTGGGTGAGGAGTTTGAAGCCCTCTA-CACAAAGTATGAA 75835
||||||||| | || || ||| ||||| || | || || | |||| ||||||
Sbjct 110918 CCCAGGTCTCGCAGAGTGCCATGGA-GAGGAATTCAGAAAACTTTATCTCAAA-TATGAA 110975
Query 75836 GAGG----AGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCT 75891
| ||| | ||| | ||| || ||| | ||| |||||| |
Sbjct 110976 CAAACTCCAGGATT-AGCTAGAAAAGTTGTTAAGGCTCAAGATTTGTGGTTTGCTATTGT 111034
Query 75892 CAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAA 75951
|||| || | || ||||| ||||| ||||| || ||||| ||||||||||| ||||
Sbjct 111035 GGAATCTCAAATTGAAACTGGTACACCTTATATTCTCTACAAAGATGCTTGTAATGAGAA 111094
Query 75952 GAGTAACCAAAAGAATTTGGGAACAAT--CAAGAGCTCAAATCTTTGCACGGAAATTTTA 76009
|| |||||||| ||||| || || || | || ||| | || || || ||| |
Sbjct 111095 ATCAAATCAAAAGAACTTGGGTACCATTTCATCA--TCCAATTTGTGTACTGAGATTATT 111152
Query 76010 GAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAG 76069
| |||||| | || || || ||||| || | || || || || | ||||||
Sbjct 111153 CAATACACATCTCCAGAGGAAGTCGCAGTTTGTAACCTTGCCTCTATTGCATTACCAAAG 111212
Query 76070 TATGTCAATGAAGAGACTCGCACT---------TTTGATTATGAAAAA------------ 76108
| | | | || | || ||| | | ||||| | |||
Sbjct 111213 TTTTTGAGAGAGGTTCCTAACACCAATCCAGAATCTTATTATAAGAAAGCCTTTGAATTT 111272
Query 76109 ----------CTTCAT--GAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATT 76156
||| || ||| | ||||||||| | || | |||||| ||| | |||
Sbjct 111273 GATCATCAGGCTTTATATGAAGTTACAAAGATTATAACTAGAAATCTCAACAAGATTATT 111332
Query 76157 GACAGAAATTTTTATCCCGTTG-AGACTGCGCGAAAGTCTAATA---TGCGACACAGACC 76212
|| ||||||| |||||| || ||| || || | ||| | | || ||||||||
Sbjct 111333 GATAGAAATTATTATCCAGTCCCAGAA---GCTAA-GACTAGCAACCTCCGTCACAGACC 111388
Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG--TGCCGCTACGCATTT 76270
|||||| | ||| |||||||||| || ||||| ||| || | | |||| | |||
Sbjct 111389 AATTGGTATTGGTATTCAAGGTCTTGCTGATGT-TTTCTTAGCCCTTCGTCTAC-CTTTT 111446
Query 76271 GATTC---AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCA 76327
|| || || || ||| || ||||| | || | || || || || |||
Sbjct 111447 GAATCCACAGGTGCAGCTAAAT---TGAATATTGAGATTTCCGAGACTATCTACTTTGCA 111503
Query 76328 TCCCTGGAGGCGAGTT-GT-GAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGG 76385
| | | ||| | || ||| | ||| | | || ||||| |||| | |
Sbjct 111504 GCTTT--AAGCGCCTCAGTAGAACTCGCTCATAAGGATGGACCCTATTCATCATTCCAAG 111561
Query 76386 GTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCA 76445
||||||| || ||||| | || || | |||||||||| | | | |||| |
Sbjct 111562 GTTCTCCAGCAAGTCAAGGTATACTCCAATACGATATGTGGGGTG-TCACTCCAACCGAT 111620
Query 76446 ACTACGACTGGGATGTT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504
| || | ||| ||||||||| ||| | | |||||| | ||| |||
Sbjct 111621 CGTTGGAATTGGAAACAACTCAAGGAAGATATCGCCAAACACGGTCTTAGAAACTCACTT 111680
Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564
|| || || |||||||| |||||||||||| ||||| || ||||| ||||| |||
Sbjct 111681 TTAATAGCCCCAATGCCCACAGCCTCCACCAGTCAAATTTTAGGTAACAATGAGGCTTTT 111740
Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624
||||||||||| | ||||| || |||||| | | |||||||| ||| ||| |
Sbjct 111741 GAACCATACACTAGTAACATATATTCCAGAAGAGTCTTAGCAGGTGAATTTACAATTATT 111800
Query 76625 AACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 76684
|| ||||| | | ||| || | | || |||| || ||||| | ||| |||| |
Sbjct 111801 AATAAGCAATTGCTTTCTGATCTTATGGAGCTTGGACTGTGGTCAATGGACTTGAAAAA- 111859
Query 76685 CTCATGGTGAAAGC---GGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATC 76741
|| | | | ||| ||||||| |||||||||| |||| || ||||| ||| |
Sbjct 111860 --CAAGATTATAGCACACCGTGGTTCTGTTCAAAATATTCCAGAGATTCCAGAGGATTTG 111917
Query 76742 AAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCA 76801
|| | || ||| ||||| ||||| || || | || | ||||| ||||| ||
Sbjct 111918 AAACAACTTTACAAGACAGTTTGGGAGATTAAACAAAGAGCCTTGATTGATATGGCTGCT 111977
Query 76802 GATCGTGGTCGCTTCATTGATCAA 76825
|| | ||| || ||||| |||
Sbjct 111978 GACAGAGGTGCTTTTATTGACCAA 112001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569197315520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |