Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq34 105 8e-18 seq24 100 4e-16 >seq34 Length=1536112 Score = 105 bits (116), Expect = 8e-18 Identities = 127/170 (75%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 194236 CGTATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGG 194294 |||| ||| |||| || |||||||||| || || |||| ||| ||||| |||||||| Sbjct 559022 CGTACACCACAAATTGGTGATAAATTTTCATCAAGACATGG-TCAGAAAGGTACTTGTGG 558964 Query 194295 TATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTAT 194354 |||| ||| ||||||||| | ||||||||| | |||| | ||||||||||| || Sbjct 558963 TATGGCATATCGTCAAGAAGATCTTCCATTTACAGTTGAAGGTGTTGTACCAGATATCAT 558904 Query 194355 TATCAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTG 194404 | | |||||| || |||||| || | ||||| ||| ||| | |||| Sbjct 558903 TGTAAATCCACATGCTATTCCATCTCGTATGACTATTGGACAATTGATTG 558854 >seq24 Length=880875 Score = 100 bits (110), Expect = 4e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 165951 TTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAAC 166010 |||| ||||| ||| | || |||||||||||||| || | ||| | |||||||| | Sbjct 828288 TTAAAGTTGCACAACTGTCAGGTTATGTTGCAGAACACACTGCCTATCATCATGGTGAGC 828229 Query 166011 AAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAG 166070 || ||| | ||| || | ||| | || || |||||||| | ||||||||| Sbjct 828228 AATCATTAAATTCAACGATTGTAAAGATGGCTCATTCGTTTGTTGGAAGCAATAATATAC 828169 Query 166071 CATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCTG 166130 | |||| | | | ||||||||||||||| |||||| ||| ||| | ||||| ||| Sbjct 828168 CTCTACTCTATCAAGGTGGTCAATTTGGTACTAGATTATTAGGTGGTGAGGATTCAGCTA 828109 Query 166131 CATCAAGATATATTTATACCAAA 166153 |||||||||| | ||| ||| Sbjct 828108 GTGCAAGATATATATTTACAAAA 828086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632489173069520