Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq27 113 4e-20 seq31 102 7e-17 seq30 96.9 3e-15 seq38 95.1 1e-14 >seq27 Length=1864556 Score = 113 bits (124), Expect = 4e-20 Identities = 169/239 (71%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| || || ||||| || ||||| |||||| | ||| || | Sbjct 1695937 ATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACAATTACCCTTGAAGTTGAAGGTTCA 1695878 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | |||||| || ||| || |||||||| | || || ||| Sbjct 1695877 GATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATCCCACCCGACCAA 1695818 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||||||||||||| ||| |||||||| | || |||| ||||| | | || || ||| Sbjct 1695817 CAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCCGACTATAAC 1695758 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA--AAATAAA 110509 |||||||||||||| || | ||| |||| | ||| | |||| || || ||||||| Sbjct 1695757 ATTCAAAAAGAATCCACTCTTCACTTGGTTCTCAGATTAAGAGGTGGTAATTAAATAAA 1695699 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| || || ||||| || ||||| |||||| | ||| || | Sbjct 1617506 ATGCAAATTTTTGTAAAGACCTTAACTGGTAAAACAATTACCCTTGAAGTTGAAGGTTCA 1617565 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | |||||| || ||| ||||||||||| | || |||||| Sbjct 1617566 GACACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCACCCGATCAA 1617625 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||||||||||||| || |||||||| | || || | |||||| | | ||||| ||| Sbjct 1617626 CAAAGACTTATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACATTATCTGATTATAAC 1617685 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||||||| || | ||| |||| | ||| | |||| || Sbjct 1617686 ATTCAAAAAGAATCCACTCTTCACTTGGTTCTCAGATTAAGAGGTGG 1617732 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 110258 TATAAGAGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTC 110317 ||| | | || |||||||||||| ||||| ||||||||||| || ||||| |||||| | Sbjct 1617263 TATTAAATATATAAAATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACTATTACCTTA 1617322 Query 110318 GAAACGGAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGC 110377 ||| || | ||| || | | | || ||| || ||| || |||||||| Sbjct 1617323 GAAGTCGAAGGTTCCGACACCATTGAAAATGTCAAAGCCAAAATTCAAGATAAAGAAGGT 1617382 Query 110378 GTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACA 110437 | || |||||||||||| | || | ||| |||||||| | || |||| | || Sbjct 1617383 ATTCCACCCGATCAACAAAGATTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACT 1617442 Query 110438 ATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCA 110475 | | ||||||||||||||||||||||| || || || Sbjct 1617443 CTCTCTGATTACAACATTCAAAAAGAATCAACATTACA 1617480 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| |||||||| || || |||||||||||| | ||| || | | Sbjct 1617734 ATGCAAATTTTTGTTAAAACTTTGACTGGTAAAACCATTACCTTAGAAGTAGAAGGTTCC 1617793 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | ||||| || ||| ||||||||||| | || || ||| Sbjct 1617794 GACACCATTGAAAACGTAAAGGCTAAAATTCAAGACAAAGAAGGTATCCCACCCGACCAA 1617853 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||||| |||| || |||||||| | || |||| | || | | ||||||||| Sbjct 1617854 CAAAGACTCATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 1617913 Query 110453 ATTCAAAAAGAATCTAC 110469 || ||||||||||| || Sbjct 1617914 ATCCAAAAAGAATCAAC 1617930 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 110266 ATTTAA-AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGG 110324 |||||| ||||||||| ||||| ||||| ||||| || ||||| |||||| | ||| | Sbjct 1696173 ATTTAATAATGCAAATCTTTGTTAAAACCTTAACTGGTAAAACTATTACCTTAGAAGTTG 1696114 Query 110325 A-GCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCC 110383 | | || | || || | | | ||||| || ||| || |||||||| | || Sbjct 1696113 AAGGCTCA-GACACCATTGAAAACGTAAAGGCCAAAATTCAAGATAAAGAAGGTATCCCA 1696055 Query 110384 GTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCG 110443 || |||||||||||||||| || |||||||| | || || | | || | | Sbjct 1696054 CCCGACCAACAAAGACTTATTTTCGCCGGTAAACAATTAGAAGACGGTCGTACTCTTTCC 1695995 Query 110444 GATTACAACATTCAAAAAGAATCTACGTTGCA 110475 ||||| ||||| ||||||||||| || || || Sbjct 1695994 GATTATAACATCCAAAAAGAATCAACATTACA 1695963 Score = 86.0 bits (94), Expect = 5e-12 Identities = 163/239 (68%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| || || || || || ||||| |||||| | ||| || | Sbjct 1617962 ATGCAAATTTTTGTAAAGACCTTGACTGGTAAAACTATTACCCTTGAAGTTGAAGGTTCA 1618021 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | |||||| || ||| ||||||||||| | || || ||| Sbjct 1618022 GATACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCACCCGACCAA 1618081 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | || | ||| |||||||| | || |||| | || | | ||||||||| Sbjct 1618082 CAAAGATTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACCCTCTCTGATTACAAC 1618141 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA--AAATAAA 110509 |||||||||||||| || | || | || | ||| | |||| || || ||||||| Sbjct 1618142 ATTCAAAAAGAATCCACTCTCCATTTAGTTCTCAGATTAAGAGGTGGTAATTAAATAAA 1618200 >seq31 Length=145395 Score = 102 bits (112), Expect = 7e-17 Identities = 170/245 (69%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||||||||| || || || || || ||||| | ||| || | Sbjct 8038 ATGCAAATCTTTGTCAAAACATTGACTGGTAAGACAATTACTTTGGAAGTTGAAGGTTCT 7979 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | ||||| || ||| ||||||||||| | || || ||| Sbjct 7978 GATACCATTGAAAATGTAAAGACCAAAATTCAAGACAAAGAAGGTATCCCACCCGACCAA 7919 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||||||||||| | ||| |||||||| || ||||||| | || | | ||||||||| Sbjct 7918 CAAAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTCTCTCTGATTACAAC 7859 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA---AAAATAAA 110509 |||||||||||||| || | || | || | ||||| |||| || | |||||| | Sbjct 7858 ATTCAAAAAGAATCAACACTCCATTTAGTTCTCAGACTTAGAGGTGGTAACTAAAATAGA 7799 Query 110510 TAAGT 110514 || || Sbjct 7798 TATGT 7794 >seq30 Length=714265 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/199 (72%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCA-TTACCGTCGAAACGGA-GCCTG 110330 |||||||| ||||||||||| || || || ||||||| ||||| | ||| || | | Sbjct 356320 ATGCAAATTTTTGTCAAAACCTTGACTGGTAAAACCAATTACCTTGGAAGTTGAAGGATC 356379 Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390 | |||||| | | | || || |||||| || |||||||| | || |||| Sbjct 356380 A-GATACTATTGAGAATGTCAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCCGATC 356438 Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450 ||||||||||||||| ||| |||||||| |||| |||| | || | | || |||| Sbjct 356439 AACAAAGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGACTACA 356498 Query 110451 ACATTCAAAAAGAATCTAC 110469 | |||||||| ||||| || Sbjct 356499 ATATTCAAAAGGAATCAAC 356517 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA-GCCTGA 110331 |||||||| ||||| || ||| | || || |||||||||||| | ||| || | | | Sbjct 356549 ATGCAAATCTTTGTAAAGACTCTTACAGGTAAAACCATTACCTTGGAAGTTGAAGGATCA 356608 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| | | | || || |||||| || |||||||| | || || || Sbjct 356609 -GATACTATTGAGAATGTTAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCCGACCA 356667 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||||||||| |||| ||| |||||||| |||| |||| | || | | || ||||| Sbjct 356668 ACAAAGACTCATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTATCTGACTACAA 356727 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 || |||||||||||||| | || | || | ||||| |||| || || Sbjct 356728 TATCCAAAAAGAATCTACTCTCCATTTAGTACTCAGACTTAGAGGTGGTAA 356778 >seq38 Length=878590 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/236 (69%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 110267 TTTAAA--ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGG 110324 |||||| |||||||| ||||| ||||| ||||| || |||||||||||| | ||| | Sbjct 148175 TTTAAACAATGCAAATCTTTGTTAAAACATTAACTGGTAAAACCATTACCCTAGAAGTTG 148234 Query 110325 AGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCG 110384 | | ||| || ||| | || ||| || || || |||||||| | || Sbjct 148235 AAGGTTCCGACACCATCGAAAATGTCAAAGCCAAAATCCAAGATAAAGAAGGTATCCCAC 148294 Query 110385 TGGATCAACAAAGACTTATTTATGC-GGGTAAACAGCTGGAGGATGCCAGAACAATGGCG 110443 |||||||||||||| |||| || |||||||| | || |||| | || | | Sbjct 148295 CCGATCAACAAAGACTCATTTTCGCTCGGTAAACAATTAGAAGATGGTCGTACTCTCTCC 148354 Query 110444 GATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||| ||||||||||| || | || |||| | ||||| |||| || Sbjct 148355 GATTACAACATCCAAAAAGAATCAACCCTCCATTTGGTACTCAGACTCAGAGGTGG 148410 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| || || ||||| || || ||||||||| | ||| || | | Sbjct 148640 ATGCAAATTTTTGTTAAGACCTTAACTGGTAAGACCATTACCCTTGAAGTTGAAGGTTCC 148699 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | ||||| |||||| ||||||||||| | || || ||| Sbjct 148700 GACACCATTGAAAACGTAAAGGCTAAGATTCAAGACAAAGAAGGTATCCCACCCGACCAA 148759 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||||| |||| || |||||||| | || |||| | || | | ||||||||| Sbjct 148760 CAAAGACTCATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 148819 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||||||||| || | || |||| | ||||| |||| || Sbjct 148820 ATCCAAAAAGAATCAACCCTCCATTTGGTACTCAGACTCAGAGGTGG 148866 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| || || || || || || ||||||||| | ||| || | Sbjct 148868 ATGCAAATCTTTGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTTGAAGGTTCT 148927 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | || ||| || || || |||||||| | || || ||| Sbjct 148928 GATACCATCGAAAATGTCAAAGCCAAAATCCAAGATAAAGAAGGTATCCCACCCGACCAA 148987 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||||| |||| ||| |||||||| | || |||| | || | | ||||||||| Sbjct 148988 CAAAGACTCATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 149047 Query 110453 ATTCAAAAAGAATCTAC 110469 ||||||||||||||||| Sbjct 149048 ATTCAAAAAGAATCTAC 149064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841328298622