Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq34 114 2e-20 seq24 91.5 2e-13 >seq34 Length=1536112 Score = 114 bits (126), Expect = 2e-20 Identities = 129/170 (76%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 193440 CGTATACCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGG 193498 |||| ||| |||| || |||||||||| ||| || |||| | | ||||| |||||||| Sbjct 559022 CGTACACCACAAATTGGTGATAAATTTTCATCAAGACATGGTC-AGAAAGGTACTTGTGG 558964 Query 193499 TATGATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTAT 193558 |||| ||| ||||||||| | |||||||||| | |||| | ||||||||||| || Sbjct 558963 TATGGCATATCGTCAAGAAGATCTTCCATTTACAGTTGAAGGTGTTGTACCAGATATCAT 558904 Query 193559 TATTAATCCAAATTGTATTCCATCCAGAATGACCATTAATCAAATTATTG 193608 | | |||||| || ||||||||| | ||||| ||| ||| | |||| Sbjct 558903 TGTAAATCCACATGCTATTCCATCTCGTATGACTATTGGACAATTGATTG 558854 >seq24 Length=880875 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 162999 TTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAAC 163058 |||| ||||| ||| | || |||||||| ||||| || | |||| | || ||||| | Sbjct 828288 TTAAAGTTGCACAACTGTCAGGTTATGTTGCAGAACACACTGCCTATCATCATGGTGAGC 828229 Query 163059 AAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAG 163118 || ||| | ||| || | ||| | || || |||||||| | ||||||||| Sbjct 828228 AATCATTAAATTCAACGATTGTAAAGATGGCTCATTCGTTTGTTGGAAGCAATAATATAC 828169 Query 163119 CATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCGG 163178 | |||| | | | ||||||||||||||| |||||| ||| ||| | ||||| || Sbjct 828168 CTCTACTCTATCAAGGTGGTCAATTTGGTACTAGATTATTAGGTGGTGAGGATTCAGCTA 828109 Query 163179 CATCAAGATATATTTATACCAAA 163201 |||||||||| | ||| ||| Sbjct 828108 GTGCAAGATATATATTTACAAAA 828086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635177171255120