Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq34 102 1e-16 seq24 100 4e-16 >seq34 Length=1536112 Score = 102 bits (112), Expect = 1e-16 Identities = 126/170 (74%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 192993 CGTATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCCCAAAAAGGAACTTGTGG 193051 |||| ||| |||| || |||||||||| || || |||| | | ||||| |||||||| Sbjct 559022 CGTACACCACAAATTGGTGATAAATTTTCATCAAGACATGGTC-AGAAAGGTACTTGTGG 558964 Query 193052 TATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTAT 193111 |||| ||| ||||||||| | ||||||||| | |||| | ||||||||||| || Sbjct 558963 TATGGCATATCGTCAAGAAGATCTTCCATTTACAGTTGAAGGTGTTGTACCAGATATCAT 558904 Query 193112 TATTAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTG 193161 | | |||||| || |||||| || | ||||| ||| ||| | |||| Sbjct 558903 TGTAAATCCACATGCTATTCCATCTCGTATGACTATTGGACAATTGATTG 558854 >seq24 Length=880875 Score = 100 bits (110), Expect = 4e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 165161 TTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAAC 165220 |||||||||| ||| | || |||||||||||||| || | ||| | |||||||| | Sbjct 828288 TTAAAGTTGCACAACTGTCAGGTTATGTTGCAGAACACACTGCCTATCATCATGGTGAGC 828229 Query 165221 AAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAG 165280 || ||| | ||| || | ||| | || || |||||||| | ||||||||| Sbjct 828228 AATCATTAAATTCAACGATTGTAAAGATGGCTCATTCGTTTGTTGGAAGCAATAATATAC 828169 Query 165281 CATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCGG 165340 | |||| | | | ||||||||||||||| |||||| ||| ||| | ||||| || Sbjct 828168 CTCTACTCTATCAAGGTGGTCAATTTGGTACTAGATTATTAGGTGGTGAGGATTCAGCTA 828109 Query 165341 CATCAAGATATATTTATACCAAA 165363 |||||||||| | ||| ||| Sbjct 828108 GTGCAAGATATATATTTACAAAA 828086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628530775741440