Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq27 91.5 3e-13 >seq27 Length=1864556 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/137 (74%), Gaps = 11/137 (8%) Strand=Plus/Minus Query 81644 AGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA------- 81696 ||||| |||| || || || ||||||||||||| ||||||| ||||||||| Sbjct 1617705 AGAGTGGATTCTTTTTGAATGTTATAATCAGATAATGTTCTACCGTCTTCTAATTGTTTA 1617646 Query 81697 ----CAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCT 81752 | || || |||||||||||| | || | || |||| || |||||||| || ||| Sbjct 1617645 CCAGCGAAAATAAGTCTTTGTTGATCGGGTGGAATACCTTCTTTGTCTTGAATTTTGGCT 1617586 Query 81753 TTTATATTTTCAATCGT 81769 |||| ||||||||| || Sbjct 1617585 TTTACATTTTCAATGGT 1617569 Score = 89.7 bits (98), Expect = 9e-13 Identities = 102/139 (73%), Gaps = 11/139 (8%) Strand=Plus/Plus Query 81644 AGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA------- 81696 ||||| |||| || || || ||||| || |||| |||||||| |||||||| Sbjct 1695738 AGAGTGGATTCTTTTTGAATGTTATAGTCGGATAAAGTTCTACCATCTTCTAATTGTTTA 1695797 Query 81697 ----CAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCT 81752 |||| || ||||||||||| | || | || |||| ||||||||||| || ||| Sbjct 1695798 CCAGCAAAAATAAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTATCTTGAATTTTGGCT 1695857 Query 81753 TTTATATTTTCAATCGTAT 81771 |||| ||||||||| |||| Sbjct 1695858 TTTACATTTTCAATAGTAT 1695876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903410590197440