Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq33 188 2e-42 seq41 140 8e-28 seq36 104 6e-17 >seq33 Length=884058 Score = 188 bits (208), Expect = 2e-42 Identities = 562/861 (65%), Gaps = 22/861 (3%) Strand=Plus/Plus Query 110294 TGATATTGACTAT------TTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGT 110347 |||| |||||||| |||||||| || ||| | ||| | | ||||| | ||| | Sbjct 110267 TGATTTTGACTATGATTTCTTTGGTTTTAAGACTTTGGAAAGATCATATTTGCAACGTAT 110326 Query 110348 CAATGGCGAGATCATTG---AACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTAT 110404 |||||| ||||||| || | |||||||| ||||| | | || | |||||||| Sbjct 110327 CAATGGT---ATCATTGTGGAAAGACCTCAACATATGTTGATGAGAGTCTCTATTGGTAT 110383 Query 110405 TCATGGACATGATATTAAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGC 110464 |||||| ||| | || |||| | |||| |||||| | | ||| Sbjct 110384 ACATGGAACTGACTTGAACGCTGCTTTTGAGACTTATGAAAAGCTCTCCATGAAGTTGTT 110443 Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTG 110524 || ||||||||||||||| | || || || || || || || | ||||| Sbjct 110444 TACTCATGCTACTCCTACATTGTTCAATGCTGGTACACCATTCCCTCAGATGTCATCTTG 110503 Query 110525 CTTTCTTC-TAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAA 110583 |||||| | ||| || || ||||| ||||| ||||| || ||| || | ||| || Sbjct 110504 -TTTCTTGGTTCAAATGAAAGAGGATTCCATTGACGGTATCTACGATACTTTGAAACAAT 110562 Query 110584 CTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAA 110643 || | ||| |||| |||| |||||||||||| ||||| | ||||| | Sbjct 110563 GCGCATTGATTAGTAAATCTGCTGGTGGAATTGGTATTGCAGTTCACAAGATTCGTGCTG 110622 Query 110644 AAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAG 110703 | | ||||| | | || || |||| | ||| | || ||||||||| | | Sbjct 110623 CTCAATCCTATATCCGTGGAACTAACGGAACTTCCAATGGTTTAGTACCAATGTTACGTG 110682 Query 110704 TCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTG 110760 | || ||||||||||| ||||| | ||||| || ||||||||| || | |||| Sbjct 110683 TATTTAACGACACTGCTCGTTATGTAGACCAAGGAGGCGGTAAGAGAAAAGGTGCTTTTG 110742 Query 110761 CTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATC 110820 | | || | || || ||||| | ||| | ||||| ||||| || || ||||||| Sbjct 110743 CAGTATACTTAGAGCCATGGCACGCTGATGTCTTTGAGTTCTTGGATCTAAAGAAAAATC 110802 Query 110821 AAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTAT 110880 | || ||||| | || ||||| ||||| ||||| | ||||||| ||| | | Sbjct 110803 ATGGTAAGGAAGAGATTCGTGCTCGTGACTTATTCTATGCCCTTTGGATTTGTGATCTCT 110862 Query 110881 TCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTG 110940 | ||| ||||||||| | ||||| ||||| || | |||||| || | || | Sbjct 110863 TTATGGAACGTGTTCCTGGAAATGAAGATTGGTCCCTCTTTTGTCCTAATGAGGCCCCAG 110922 Query 110941 GTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAG 111000 |||| | || ||||| | || || | | ||||| ||||||||| || | Sbjct 110923 GTCTCGCAGAGTGCCATGGAGAGGAATTCAGAAAACTTTATCTCAAATATGAACAA-ACT 110981 Query 111001 GCAAGTTTCGCAAACAAA----TTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCA 111056 || | || || | ||| || |||||||| | ||||| || | ||||| Sbjct 110982 CCAGGATTAGCTAGAAAAGTTGTTAAGGCTCAAGATTTGTGGTTTGCTATTGTGGAATCT 111041 Query 111057 CAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAAT 111116 ||| |||||||||| || ||||||||| | || |||||| | |||| ||||| ||| Sbjct 111042 CAAATTGAAACTGGTACACCTTATATTCTCTACAAAGATGCTTGTAATGAGAAATCAAAT 111101 Query 111117 CAAATGAATTTAGGAACAATT 111137 |||| ||| || || || ||| Sbjct 111102 CAAAAGAACTTGGGTACCATT 111122 >seq41 Length=540962 Score = 140 bits (154), Expect = 8e-28 Identities = 125/154 (81%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 305333 CTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTA 305392 ||||||||| | ||||||||||| |||||| | ||||| ||||||||||||| || |||| Sbjct 495754 CTGTTCAATCGTCAACCATCACTTCATAAACTCTCTATTATGGCTCATAAAGCCAGAGTA 495695 Query 305393 TTATC-TGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTT 305451 | | |||| || |||| || |||| | ||| |||||| || || ||||| ||||| Sbjct 495694 ATGCCATGGAGA-ACTCTTCGTTTCAATGAATGTGTTTGTACACCATACAATGCCGATTT 495636 Query 305452 TGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 |||||| |||||||||||||| ||| |||||||| Sbjct 495635 TGATGGTGATGAAATGAATATTCATTTACCTCAA 495602 >seq36 Length=2033623 Score = 104 bits (114), Expect = 6e-17 Identities = 271/403 (67%), Gaps = 18/403 (4%) Strand=Plus/Plus Query 131739 TTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAAATTTCCTGCAATTA 131798 ||||||| ||| | ||| ||||||||| ||||| || | | |||| | | Sbjct 729853 TTAAAAACCCAGAACAAAAAGCTAAATTATTCAATGCTATAGAAACTATTCCATGTGTGA 729912 Query 131799 AAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCC-GCTAATTTTTCTACA 131857 ||||||| ||||||||||| | | |||||| ||| ||| | | |||| | | Sbjct 729913 AAAAGAAGGCAGAATGGGCCTTGAGATGGAT-CAA-----TTCTAGATCATTTGCAGAGA 729966 Query 131858 AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCA--GGTGCTTTCTGTGCTA 131915 || | || || ||||| |||||||||||| | |||||| ||| ||||||| | | Sbjct 729967 -GATTGGTGGCATTTGCAGCTGTTGAAGGTATCT--TTTTCAGTGGTAGTTTCTGTTCCA 730023 Query 131916 TCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCT 131975 |||||||||| ||||| | || || ||||| || | |||| |||||| |||| || Sbjct 730024 TCTTTTGGCTAAAGAAAAGAGGTTTAATGCCAGGTTTGACATTCTCCAATGAATTGATTA 730083 Query 131976 CGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTATAGAAAATTTGCTGATA 132035 | ||||||| | ||| | | |||||| || |||| || ||| | | ||| Sbjct 730084 GTCGTGATGAAGGTCTACATTGTAACTTTGCTTGTTTGCTCTACAGTAAACTCGTAAATA 730143 Query 132036 AACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTTG-ATATCGAGAAGGAG 132094 | | |||||||| | |||| | | |||| | || || |||| || | || ||||| Sbjct 730144 GATTAGATGAAAAAATCATTATAGACATTATCAAAGATGCTGTTGCATGT-GAAAAGGAA 730202 Query 132095 TTTATTACAGAAGCTTTGCC--TTGCAATTTGATTGGGATGAA 132135 ||| | || ||| || | || ||| || | ||||| ||||| Sbjct 730203 TTTGTAACTGAATCTCTACCAGTTG--ATCTCATTGGTATGAA 730243 Score = 95.1 bits (104), Expect = 3e-14 Identities = 187/276 (68%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 131432 CTATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTC 131491 ||||||||||||||| | | || | | |||||||||| || | | || | ||| Sbjct 729481 CTATTTCCAATTAAATACCCAGACATATGGAATATGTATAAACAAGCAGAAGCCTCATTC 729540 Query 131492 TGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAA---AAATTAACC 131548 ||||| | |||||||| ||| | ||| ||||| |||| |||||| || |||| Sbjct 729541 TGGACAGCAGAAGAGATTGATTTAGCCAGTGATATCAATGAATGGGAAAATAAGTTAAAT 729600 Query 131549 TTGAATGAAAAAGATTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGCATT 131608 ||||||||| |||| ||||||| || | ||||| || || | ||||| ||| Sbjct 729601 GAAAATGAAAAACATTTCATTTCCAATGTATTAGCATTTTTTGCAGCTTCAGATGGTATT 729660 Query 131609 GTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGAAGTAACATCG 131668 |||| ||||||||| | | ||| || || ||| || | || || |||| | || Sbjct 729661 GTTAATGAAAATCTAGCAACTAAATTTATGAGTGAAGTTCAAATACCAGAAGCCAGATGT 729720 Query 131669 TTCTACACATTTCAAGCCGCTGTTGAATCTATTCAT 131704 ||||| || ||| || ||||| ||||||| Sbjct 729721 TTCTATGGTTTCCAAATTGCCATTGAAAATATTCAT 729756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186811978873894