Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq31 111 4e-19 seq30 111 4e-19 seq27 109 1e-18 seq38 102 2e-16 seq12 100 7e-16 >seq31 Length=145395 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| |||||| | || || || || || ||||||||||| ||| ||||||| Sbjct 8035 CAAATCTTTGTCAAAACATTGACTGGTAAGACAATTACTTTGGAAGTTGAAGGTTCTGAT 7976 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| |||||| || |||||||| |||||||| || || ||| ||| Sbjct 7975 ACCATTGAAAATGTAAAGACCAAAATTCAAGACAAAGAAGGTATCCCACCCGACCAACAA 7916 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||||||||| || || || || | || ||||| | ||| | | ||||||||| | Sbjct 7915 AGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTCTCTCTGATTACAACATT 7856 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 || ||||| || || || || | ||| | |||||| || Sbjct 7855 CAAAAAGAATCAACACTCCATTTAGTTCTCAGACTTAGA 7817 Score = 95.1 bits (104), Expect = 3e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| |||||| | || || || || || || || ||||| ||| |||||||| Sbjct 8492 CAAATCTTTGTCAAAACATTGACTGGTAAGACAATTACCTTAGAAGTTGAAGGTTCTGAC 8433 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || || ||||| ||||| |||||||| ||| || ||| ||| Sbjct 8432 ACCATTGAGAATGTTAAAACCAAGATCCAAGATAAAGAAGGTATTCCACCCGACCAACAA 8373 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||||||| || || || || || ||||||||||| | ||| | | || || || | Sbjct 8372 AGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGACTATAATATA 8313 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || ||||| || ||||| || | ||| | ||||| Sbjct 8312 CAAAAAGAATCAACTCTCCATTTAGTTCTCAGACT 8278 Score = 87.8 bits (96), Expect = 4e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || || || || ||||||||||| ||| ||||||| || | ||| Sbjct 8251 AAAACATTGACTGGTAAGACAATTACTTTGGAAGTTGAAGGTTCTGATACCATTGAAAAT 8192 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || || |||||| ||||| |||||||| ||| || || ||| | || || || Sbjct 8191 GTTAAAACAAAGATCCAAGATAAAGAAGGTATTCCACCCGATCAACAACGTCTCATTTTT 8132 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || ||||||||||| | || || | || || ||| | || || || || Sbjct 8131 GCTGGTAAACAATTGGAAGATGGTCGTACCTTATCTGACTATAACATACAAAAGGAATCA 8072 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 ||||| || | ||| | ||||| Sbjct 8071 ACTCTCCATTTAGTTCTCAGACT 8049 Score = 84.2 bits (92), Expect = 5e-11 Identities = 152/220 (69%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| || || | || || || || || || || || || ||| ||||||| Sbjct 8720 CAAATATTTGTAAAGACTTTGACTGGTAAGACAATTACCTTAGAGGTAGAAGGTTCTGAT 8661 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||| | ||| || ||||| ||||| || || || ||| || Sbjct 8660 ACCATTGAAAATGTTAAAACCAAA-ATCCAAGATAAAGAGGGTATCCCACCCGACCAACA 8602 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||||||||| || || || || || ||||||||||| | ||||| | || || ||| | Sbjct 8601 AAGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTATCTGACTATAACAT 8542 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 || ||||| || || || || | ||| | |||||| || Sbjct 8541 TCAAAAAGAATCAACACTACATTTAGTTCTCAGACTTAGA 8502 >seq30 Length=714265 Score = 111 bits (122), Expect = 4e-19 Identities = 153/213 (72%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 206180 TTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTC 206238 |||| ||| || || ||||| ||||| || || |||||||| ||| | || || || | Sbjct 356558 TTTGTAAAGACTCTTACAGGTAAAACCATTACCTTGGAAGTTGAAGGATCAGATACTATT 356617 Query 206239 GAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTT 206298 || || ||| ||||||||||| |||||||| || || ||| |||||||| Sbjct 356618 GAGAATGTTAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCCGACCAACAAAGACTC 356677 Query 206299 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 206358 || || || || || || ||||||||||| | ||||| | || ||||| |||| ||| Sbjct 356678 ATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTATCTGACTACAATATCCAAAAA 356737 Query 206359 GAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 || |||||||| || | || | |||||| || Sbjct 356738 GAATCTACTCTCCATTTAGTACTCAGACTTAGA 356770 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | ||||| ||||| || || ||||| || ||| ||||||| || | || Sbjct 356107 AAAACTTTGACAGGTAAAACAATTACCTTGGAGGTAGAAGGTTCTGATACTATAGAGAAT 356166 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| |||||||| || || ||| ||| | || || || Sbjct 356167 GTTAAGACCAAGATCCAAGATAAAGAAGGTATCCCACCCGACCAACAACGTCTCATTTTT 356226 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || ||||||||||| | ||| | | || ||||| |||| ||||| || Sbjct 356227 GCTGGTAAACAATTGGAAGATGGTCGTACTCTTTCTGACTACAATATCCAAAAAGAATCA 356286 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| || | ||| | |||||| || Sbjct 356287 ACTCTCCATTTAGTTCTAAGACTTAGA 356313 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| ||||| || ||||| ||| |||| || || ||||| Sbjct 370059 AAAACTTTAACTGGTAAAACCATCACCTTAGAAGTCGAAGGTTCAGATACCATCGAAAAC 370118 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || || ||||| |||||||| || || || ||| | | |||||| Sbjct 370119 GTCAAGGCCAAAATCCAAGACAAAGAAGGTATCCCACCCGATCAACAACGTTTAATCTTC 370178 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| || || |||||||| || | ||| | | |||||||| |||| ||||| ||| Sbjct 370179 GCCGGTAAACAATTGGAAGACGGTCGTACTCTCTCTGATTACAATATCCAAAAAGAATCT 370238 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 || || || | || | |||||| || Sbjct 370239 ACCCTCCATTTAGTACTCAGACTTAGA 370265 Score = 87.8 bits (96), Expect = 4e-12 Identities = 150/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGA-TCACTTTGGAAGTGGAAAGTTCTGACACAG 206236 ||||| |||||| | || || ||||| | | || |||||||| ||| | || || || Sbjct 356328 TTTTGTCAAAACCTTGACTGGTAAAACCAATTACCTTGGAAGTTGAAGGATCAGATACTA 356387 Query 206237 TCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296 | || || ||| ||||||||||| |||||||| || || || ||||||| Sbjct 356388 TTGAGAATGTCAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCCGATCAACAAAGAC 356447 Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356 |||| || || || || || ||||||||||| | ||| | | || ||||| | || | Sbjct 356448 TTATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGACTACAATATTCAAA 356507 Query 206357 AAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 | || || ||||| || | ||| | |||||| || Sbjct 356508 AGGAATCAACTCTCCATTTAGTTCTCAGACTTAGA 356542 >seq27 Length=1864556 Score = 109 bits (120), Expect = 1e-18 Identities = 152/209 (73%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 206179 TTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || ||||| || || | ||||| ||| |||| ||||| | Sbjct 1617514 TTTTGTAAAGACCTTAACTGGTAAAACAATTACCCTTGAAGTTGAAGGTTCAGACACCAT 1617573 Query 206238 CGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296 ||| ||||| || ||| |||||||| |||||||| ||| || || ||||||| Sbjct 1617574 TGAAAATGTAAAAGCCAAA-ATTCAAGACAAAGAAGGTATTCCACCCGATCAACAAAGAC 1617632 Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356 |||| ||||| || || || || ||||| || || || || | ||||| ||| | || | Sbjct 1617633 TTATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACATTATCTGATTATAACATTCAAA 1617692 Query 206357 AAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 |||| || ||||||||| | ||| | ||| Sbjct 1617693 AAGAATCCACTCTTCACTTGGTTCTCAGA 1617721 Score = 107 bits (118), Expect = 5e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAA-GCA 206252 || || ||||| || || | ||||| ||| |||| || || | ||| ||||| || Sbjct 1695913 ACTGGTAAAACAATTACCCTTGAAGTTGAAGGTTCAGATACTATTGAAAATGTAAAAGCC 1695854 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| |||||||| |||||||| || || ||| ||||||||||| || || || || Sbjct 1695853 AAA-ATTCAAGATAAAGAAGGTATCCCACCCGACCAACAAAGACTTATTTTTGCTGGTAA 1695795 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || || |||||||| || ||||| |||| || ||| | || ||||| || |||||||| Sbjct 1695794 ACAATTAGAAGATGGTAGAACTTTATCCGACTATAACATTCAAAAAGAATCCACTCTTCA 1695735 Query 206373 CCTTGTTTTGAGA 206385 | | ||| | ||| Sbjct 1695734 CTTGGTTCTCAGA 1695722 Score = 104 bits (114), Expect = 6e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| || || || ||||| ||| | || ||||| | ||| Sbjct 1696150 AAAACCTTAACTGGTAAAACTATTACCTTAGAAGTTGAAGGCTCAGACACCATTGAAAAC 1696091 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| || |||||||| |||||||| || || ||| ||||||||||| ||| Sbjct 1696090 GTAAAGGCCAAAATTCAAGATAAAGAAGGTATCCCACCCGACCAACAAAGACTTATTTTC 1696031 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| || || || ||||| || | ||| | ||||||| ||| |||| ||||| || Sbjct 1696030 GCCGGTAAACAATTAGAAGACGGTCGTACTCTTTCCGATTATAACATCCAAAAAGAATCA 1695971 Query 206365 AC 206366 || Sbjct 1695970 AC 1695969 >seq38 Length=878590 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || || || | ||||| ||| |||| ||||| | ||| |||||| Sbjct 148664 ACTGGTAAGACCATTACCCTTGAAGTTGAAGGTTCCGACACCATTGAAAACGTAAAGGCT 148723 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| |||||||| || || ||| |||||||| || |||||||| || Sbjct 148724 AAGATTCAAGACAAAGAAGGTATCCCACCCGACCAACAAAGACTCATTTTCGCCGGTAAA 148783 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || || |||||||| | ||| | | ||||||||| |||| ||||| || || || || Sbjct 148784 CAATTAGAAGATGGTCGTACTCTTTCTGATTACAACATCCAAAAAGAATCAACCCTCCA 148842 Score = 98.7 bits (108), Expect = 2e-15 Identities = 138/190 (73%), Gaps = 3/190 (2%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| || || | ||||| ||| |||| ||||| ||||| Sbjct 148198 AAAACATTAACTGGTAAAACCATTACCCTAGAAGTTGAAGGTTCCGACACCATCGAAAAT 148257 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| || ||||| |||||||| || || || |||||||| || || Sbjct 148258 GTCAAAGCCAAA-ATCCAAGATAAAGAAGGTATCCCACCCGATCAACAAAGACTCATTTT 148316 Query 206304 CGC-CGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 ||| ||| || || || |||||||| | ||| | ||||||||||| |||| ||||| | Sbjct 148317 CGCTCGGTAAACAATTAGAAGATGGTCGTACTCTCTCCGATTACAACATCCAAAAAGAAT 148376 Query 206363 CTACTCTTCA 206372 | || || || Sbjct 148377 CAACCCTCCA 148386 >seq12 Length=1224149 Score = 100 bits (110), Expect = 7e-16 Identities = 185/269 (69%), Gaps = 8/269 (3%) Strand=Plus/Plus Query 206126 AGGAAAAATATATTTTAAG---AAATATATAAAGTAAGGCTAAAATGTACCAGATATTTT 206182 ||||||||| || |||| ||||||||| |||| | || |||| ||||| || Sbjct 427149 AGGAAAAATGAATATTAATTGAAAATATATATAGTACG--TAGAATG---CAGATTTTCG 427203 Query 206183 GCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAAT 206242 ||||| | || || || || || || || ||||| ||| |||| || || ||||| Sbjct 427204 TTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAAGGTTCAGATACCATCGAAA 427263 Query 206243 CAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 || ||| || || ||||| |||||||| || || || ||||||||||||| Sbjct 427264 ATGTCAAGGCCAAAATCCAAGACAAAGAAGGTATCCCACCCGATCAACAAAGACTTATCT 427323 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 | ||||| || || || ||||| || | || | | |||||||| |||| ||||| | Sbjct 427324 TTGCCGGTAAACAATTAGAAGACGGTCGTACCCTCTCTGATTACAATATCCAAAAAGAAT 427383 Query 206363 CTACTCTTCACCTTGTTTTGAGACTTCGA 206391 | || || || | || | |||||| || Sbjct 427384 CAACCCTCCATTTAGTCCTCAGACTTAGA 427412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819982327734