Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 1e-12 >seq3 Length=1465623 Score = 89.7 bits (98), Expect = 1e-12 Identities = 273/409 (67%), Gaps = 20/409 (5%) Strand=Plus/Minus Query 298902 ACCAAAAAGAATGCTATTCTCACTGGTGAAGCTGGTGTAGGTAAAACACAAATCATCGAC 298961 || || || ||| | |||||| ||||||| ||||||| ||||| || ||| | || Sbjct 784841 ACAAAGAACAATCCAGTTCTCATTGGTGAACCTGGTGTTGGTAAGACTGCTATCGTAGAG 784782 Query 298962 GGGCTTGCACAAGCTATTGCTGATGGTAACGTACCTGAACACCTGAAAGACGTTGAAATT 299021 || | || || |||| |||| | |||||||| || ||||| || | | Sbjct 784781 GGTTTAGCTCAGAGAATTGTAAATGGGGATGTACCTGA-CAGTATAAAGAACAAGAGAGT 784723 Query 299022 -CTTTCACTAAATGTTGGTGCA---TTGACTGCTGGTACTAAGTATCGTGGTGAATTTGA 299077 || || | || |||| || ||| ||||||| | |||| |||||||| ||||| Sbjct 784722 ACTAACATTGGAT-TTGG--CAAGTTTGGTTGCTGGTGCAAAGTTCCGTGGTGATTTTGA 784666 Query 299078 AGAACGCATCGACAATTTGCTAAAAGAACT---AAAGAAACGTGAAAA--TACTATTGTT 299132 ||| | || | | | | || ||||| || | | | |||| | | ||||||| Sbjct 784665 AGAGAGAATGAAGAGTATTCTTAAAGATCTTGCACATTATCGTGGTGAGGTTATATTGTT 784606 Query 299133 TTCATTGATGAAATTCATATTATGGTTGGGGCTGGTTCCGCAAGTAATGGTTCTATGGAC 299192 | || |||||| |||||| | ||||||| |||||| | | | || ||| ||||| Sbjct 784605 T--ATAGATGAACTTCATACTTTGGTTGGTGCTGGTGCTGT--GGAA-GGTGGAATGGAT 784551 Query 299193 ATGAGCAATATGCTTAAGCCAGCACTTT-CACGTGGTGAGATTCGTGTAATTGGTGCAAC 299251 || |||||||| || ||| || || | | ||||| | | | |||||||||| Sbjct 784550 GCTAGTAATATGCTAAAACCA-CAGTTGGCTAGAGGTGATCTACATTGCGTTGGTGCAAC 784492 Query 299252 AACATATGATGAATATCGTAAAAATATCGAGAAAGATAGTGCATTAACT 299300 ||| || ||||||||||||| |||| || || ||| ||||||| || Sbjct 784491 TACAACTGCTGAATATCGTAAATATATTGAAAAGGATCCTGCATTAGCT 784443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115170428440926