Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq27 107 2e-18 seq38 93.3 4e-14 seq12 89.7 5e-13 seq31 87.8 2e-12 seq30 82.4 7e-11 >seq27 Length=1864556 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 || ||||||| |||| ||||||||||||||||| || | ||||| |||||| Sbjct 1617486 ACTAAATGTAATGTTGATTCTTTTTGAATGTTGTAATCAGAGAGAGTACGACCATCTTCT 1617427 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | |||||||||| | |||||| | |||||||| || || || ||||||||||| | Sbjct 1617426 AATTGTTTACCGGCAAAGATTAATCTTTGTTGATCGGGTGGAATACCTTCTTTATCTTGA 1617367 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| ||| | | ||| | || |||| || ||||| | || | |||||| Sbjct 1617366 ATTTTGGCTTTGACATTTTCAATGGTGTCGGAACCTTCGACTTCTAAGGTAATAGTTTTA 1617307 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| | |||||| | ||||| ||||| Sbjct 1617306 CCAGTTAAAGTTTTAACAAAAATTTGCAT 1617278 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| ||||| | | || ||||||||||||||||| || | |||||| |||||| Sbjct 1618171 AACTAAATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGAGAGGGTACGACCATCTTC 1618112 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | |||||||||| | |||||| | ||||| || || || || |||||||| || Sbjct 1618111 TAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCGGGTGGAATACCTTCTTTGTCTTG 1618052 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 |||||| ||| | | ||| | ||||| | || ||||| | || | ||||| Sbjct 1618051 AATTTTGGCTTTTACATTTTCAATGGTATCTGAACCTTCAACTTCAAGGGTAATAGTTTT 1617992 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || |||| ||||| ||||| Sbjct 1617991 ACCAGTCAAGGTCTTTACAAAAATTTGCAT 1617962 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 || ||||| | | |||| |||||||| |||||||| || | ||||| |||||| Sbjct 1617942 ACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCT 1617883 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | |||||||||| | || || | ||||| || || || || |||||||| || | Sbjct 1617882 AATTGTTTACCGGCGAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTGTCTTGA 1617823 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | ||| | || |||| || ||||| | || | |||||| Sbjct 1617822 ATTTTAGCCTTTACGTTTTCAATGGTGTCGGAACCTTCTACTTCTAAGGTAATGGTTTTA 1617763 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| |||||| | ||||| ||||| Sbjct 1617762 CCAGTCAAAGTTTTAACAAAAATTTGCAT 1617734 >seq38 Length=878590 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | |||| |||||||| |||||||| || | ||||| |||||| Sbjct 148620 ACCAAATGGAGAGTTGATTCTTTTTGGATGTTGTAATCAGAGAGAGTACGACCATCTTCT 148561 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | |||||||||| | |||||| ||| ||||| || || || || ||||||||||| Sbjct 148560 AATTGTTTACCGGCAAAGATTAAACGTTGTTGGTCGGGTGGGATACCTTCTTTATCTTGG 148501 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| ||| | | ||| | ||||| | || ||||| | || | || ||| Sbjct 148500 ATTTTAGCTTTGACATTTTCGATGGTATCAGAACCTTCAACTTCAAGGGTAATGGTCTTA 148441 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| || || | ||||| ||||| Sbjct 148440 CCAGTCAAGGTCTTAACAAAAATTTGCAT 148412 Score = 82.4 bits (90), Expect = 7e-11 Identities = 145/210 (69%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | |||| |||||||| |||||||| ||| | ||||| |||||| Sbjct 148392 ACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCGGAGAGAGTACGACCATCTTCT 148333 Query 131975 AGCTGTTTACCG-GAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | ||||||||| | | || || | |||||||| || || || ||||||||||| Sbjct 148332 AATTGTTTACCGAGCGAAAATGAGTCTTTGTTGATCGGGTGGGATACCTTCTTTATCTTG 148273 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| ||| | | ||| | || |||| || ||||| | || | ||||| Sbjct 148272 GATTTTGGCTTTGACATTTTCGATGGTGTCGGAACCTTCAACTTCTAGGGTAATGGTTTT 148213 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||| | ||||| | || || ||||| Sbjct 148212 ACCAGTTAATGTTTTAACAAAGATTTGCAT 148183 >seq12 Length=1224149 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 || ||||| | | |||| |||||||| || ||||| || | |||||| ||||| Sbjct 427399 ACTAAATGGAGGGTTGATTCTTTTTGGATATTGTAATCAGAGAGGGTACGACCGTCTTCT 427340 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | |||||||||| | |||| || | |||||||| || || || |||||||| || Sbjct 427339 AATTGTTTACCGGCAAAGATAAGTCTTTGTTGATCGGGTGGGATACCTTCTTTGTCTTGG 427280 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | ||| | ||||| | || ||||| | || | || ||| Sbjct 427279 ATTTTGGCCTTGACATTTTCGATGGTATCTGAACCTTCAACTTCTAAGGTAATGGTCTTA 427220 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| | |||||| | |||||||||||| Sbjct 427219 CCAGTTAAAGTTTTAACGAAAATCTGCAT 427191 >seq31 Length=145395 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| ||||| | |||| || ||||| ||||| ||||| | |||||| |||||| Sbjct 8057 AACTAAATGGAGAGTTGATTCCTTTTGTATGTTATAGTCAGATAAGGTACGACCATCTTC 8116 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | |||||||| | | | || ||||| |||||||| || || || ||||||||||| | Sbjct 8117 CAATTGTTTACCAGCAAAAATGAGACGTTGTTGATCGGGTGGAATACCTTCTTTATC-TT 8175 Query 132034 AATTTTTTGTTTCAAC-TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTT 132092 | ||||||| ||| | ||| | ||||| | || ||||| | || | || | Sbjct 8176 GGATCTTTGTTTTAACATTTTCAATGGTATCAGAACCTTCAACTTCCAAAGTAATTGTCT 8235 Query 132093 TACCAGTCAGAGTTTTT-ATGAAAATCTGCAT 132123 ||||||||| |||||| | |||| ||||| Sbjct 8236 TACCAGTCAATGTTTTTGACAAAAAATTGCAT 8267 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| ||||||| |||| |||||||||||||| ||||| | ||||| |||||| Sbjct 8514 AACTAAATGTAGTGTTGATTCTTTTTGAATGTTATAGTCAGATAAAGTACGACCATCTTC 8573 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | |||||||| | | | || || | ||||| || || || || || |||||||| | Sbjct 8574 CAATTGTTTACCAGCAAAAATAAGTCTTTGTTGGTCGGGTGGGATACCCTCTTTATC-TT 8632 Query 132034 AATTTTTTGTTTCAAC-TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTT 132092 |||| |||| ||| | ||| | ||||| | || || || | || | || | Sbjct 8633 GGATTTTGGTTTTAACATTTTCAATGGTATCAGAACCTTCTACCTCTAAGGTAATTGTCT 8692 Query 132093 TACCAGTCAGAGTTTTTATGAAAATCTGCATGACTTATT 132131 ||||||||| ||| |||| || || ||||| | ||||| Sbjct 8693 TACCAGTCAAAGTCTTTACAAATATTTGCATAATTTATT 8731 >seq30 Length=714265 Score = 82.4 bits (90), Expect = 7e-11 Identities = 152/219 (69%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| ||||| | |||| |||||||| || |||||||| | ||||| |||||| Sbjct 356301 AACTAAATGGAGAGTTGATTCTTTTTGGATATTGTAGTCAGAAAGAGTACGACCATCTTC 356242 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | |||||||| | | | || ||||| ||||| || || || || ||||||||||| | Sbjct 356241 CAATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCGGGTGGGATACCTTCTTTATC-TT 356183 Query 132034 AATTTTTTGTTTCAAC-TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTT 132092 | || || | ||| | || | |||||| | || || || | || | |||| Sbjct 356182 GGATCTTGGTCTTAACATTCTCTATAGTATCAGAACCTTCTACCTCCAAGGTAATTGTTT 356123 Query 132093 TACCAGTCAGAGTTTTTATGAAAATCTGCATGACTTATT 132131 |||| |||| |||||| | ||||| ||||| | ||||| Sbjct 356122 TACCTGTCAAAGTTTTAACAAAAATTTGCATTA-TTATT 356085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610878287440