Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq27 134 1e-26 seq38 122 7e-23 seq31 111 1e-19 seq30 105 5e-18 >seq27 Length=1864556 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||||||||| |||||||| || ||||||||| | ||| |||| | Sbjct 1617734 ATGCAAATTTTTGTTAAAACTTTGACTGGTAAAACCATTACCTTAGAAGTAGAAGGTTCC 1617793 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || || |||||| ||||||||||| | || || ||| Sbjct 1617794 GACACCATTGAAAACGTAAAGGCTAAAATTCAAGACAAAGAAGGTATCCCACCCGACCAA 1617853 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| || |||| || || ||||||||||||||| | ||| | ||||||||| Sbjct 1617854 CAAAGACTCATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 1617913 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| || || ||||||||| | || ||| |||| || Sbjct 1617914 ATCCAAAAAGAATCAACCCTCCATTTAGTACTCAGATTAAGAGGTGG 1617960 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 ||||||||||||||||||||||| || ||||| || || |||||| | ||| ||| Sbjct 1617275 AAAATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACTATTACCTTAGAAGTCGAAGGT 1617334 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 ||| | ||| | || ||| |||||| || |||||||| | || ||| Sbjct 1617335 TCCGACACCATTGAAAATGTCAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCCGAT 1617394 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||||| | || | ||| || ||||||||||||||| | ||| | |||||| Sbjct 1617395 CAACAAAGATTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGATTAC 1617454 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| ||||||||||| ||| ||||||||||| | || ||| |||| || Sbjct 1617455 AACATTCAAAAAGAATCAACATTACATTTAGTACTCAGATTAAGAGGTGG 1617504 Score = 125 bits (138), Expect = 6e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 106253 TTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGA 106312 ||||| ||||||||| ||||||||||| || ||||| || || |||||| | ||| || Sbjct 1696172 TTTAATAATGCAAATCTTTGTTAAAACCTTAACTGGTAAAACTATTACCTTAGAAGTTGA 1696113 Query 106313 ACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGT 106372 | | || | ||| | || || |||||| || |||||||| | || Sbjct 1696112 AGGCTCAGACACCATTGAAAACGTAAAGGCCAAAATTCAAGATAAAGAAGGTATCCCACC 1696053 Query 106373 TGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGA 106432 || |||||||| ||||||| || || |||||||||||||| | ||| | ||| Sbjct 1696052 CGACCAACAAAGACTTATTTTCGCCGGTAAACAATTAGAAGACGGTCGTACTCTTTCCGA 1695993 Query 106433 TTACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||| ||||| ||||||||||| ||| ||||||||||| | || ||| |||| || Sbjct 1695992 TTATAACATCCAAAAAGAATCAACATTACATTTAGTACTCAGATTAAGAGGTGG 1695939 Score = 122 bits (134), Expect = 7e-23 Identities = 167/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||| || || ||||| || || |||||| | ||| ||| Sbjct 1695937 ATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACAATTACCCTTGAAGTTGAAGGTTCA 1695878 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || ||| |||||| || |||||||| | || || ||| Sbjct 1695877 GATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATCCCACCCGACCAA 1695818 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| ||||||| ||| || ||||||||||||||| || |||| | ||| || ||| Sbjct 1695817 CAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCCGACTATAAC 1695758 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGATAAT 106491 || ||||||||||| || || || || || | || ||| |||| || |||| Sbjct 1695757 ATTCAAAAAGAATCCACTCTTCACTTGGTTCTCAGATTAAGAGGTGG-TAAT 1695707 Score = 109 bits (120), Expect = 4e-19 Identities = 164/232 (71%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| || || |||||||| || || |||||| | ||| ||| Sbjct 1617962 ATGCAAATTTTTGTAAAGACCTTGACTGGTAAAACTATTACCCTTGAAGTTGAAGGTTCA 1618021 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || ||| |||||| ||||||||||| | || || ||| Sbjct 1618022 GATACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCACCCGACCAA 1618081 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | ||| || ||||||||||||||| | || | ||||||||| Sbjct 1618082 CAAAGATTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACCCTCTCTGATTACAAC 1618141 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGATAAT 106491 || ||||||||||| || || |||||||| | || ||| |||| || |||| Sbjct 1618142 ATTCAAAAAGAATCCACTCTCCATTTAGTTCTCAGATTAAGAGGTGG-TAAT 1618192 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| || || || ||||| || || |||||| | ||| ||| Sbjct 1617506 ATGCAAATTTTTGTAAAGACCTTAACTGGTAAAACAATTACCCTTGAAGTTGAAGGTTCA 1617565 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || ||| |||||| ||||||||||| | || |||||| Sbjct 1617566 GACACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCACCCGATCAA 1617625 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| ||||||| || || |||||||||||||| || ||| | ||||| ||| Sbjct 1617626 CAAAGACTTATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACATTATCTGATTATAAC 1617685 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| || || || || || | || ||| |||| || Sbjct 1617686 ATTCAAAAAGAATCCACTCTTCACTTGGTTCTCAGATTAAGAGGTGG 1617732 >seq38 Length=878590 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| |||||||| || |||||||| |||||||||||| ||||| ||| Sbjct 148868 ATGCAAATCTTTGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTTGAAGGTTCT 148927 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | | | | || ||| ||||| || |||||||| | || || ||| Sbjct 148928 GATACCATCGAAAATGTCAAAGCCAAAATCCAAGATAAAGAAGGTATCCCACCCGACCAA 148987 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| || |||| ||| || ||||||||||||||| | ||| | ||||||||| Sbjct 148988 CAAAGACTCATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 149047 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || |||||||||||||| || ||| | || | || ||| ||||||| Sbjct 149048 ATTCAAAAAGAATCTACTCTCCATCTTGTTCTTAGATTAAGAGGAGG 149094 >seq31 Length=145395 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| |||||||||||||| ||||| ||||| ||||| ||| Sbjct 8038 ATGCAAATCTTTGTCAAAACATTGACTGGTAAGACAATTACTTTGGAAGTTGAAGGTTCT 7979 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || || |||||| ||||||||||| | || || ||| Sbjct 7978 GATACCATTGAAAATGTAAAGACCAAAATTCAAGACAAAGAAGGTATCCCACCCGACCAA 7919 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| ||||| | ||| || |||||| | || ||| | ||| | ||||||||| Sbjct 7918 CAAAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTCTCTCTGATTACAAC 7859 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || ||||||||||| ||||| |||||||| Sbjct 7858 ATTCAAAAAGAATCAACACTCCATTTAGT 7830 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106242 ATTTATAAGAGTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACC 106301 || ||| ||| | || |||||||| ||||| || || |||||||| ||||| |||||| Sbjct 8741 ATATATTAGAAATAAATTATGCAAATATTTGTAAAGACTTTGACTGGTAAGACAATTACC 8682 Query 106302 GTGGAAACAGAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAA 106361 | || |||| ||| | ||| | || ||| ||||| || ||||| Sbjct 8681 TTAGAGGTAGAAGGTTCTGATACCATTGAAAATGTTAAAACCAAAATCCAAGATAAAGAG 8622 Query 106362 GGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAA 106421 || | || || |||||||| ||||||| ||| || |||||||| |||||| | Sbjct 8621 GGTATCCCACCCGACCAACAAAGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGT 8562 Query 106422 ACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGT 106468 ||| | || || ||||| ||||||||||| |||||||||||||| Sbjct 8561 ACTTTATCTGACTATAACATTCAAAAAGAATCAACACTACATTTAGT 8515 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAA-CATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| ||||||| |||| |||||||||| ||||| ||||| ||||| ||| Sbjct 8267 ATGCAATTTTTTGTCAAAAACATTGACTGGTAAGACAATTACTTTGGAAGTTGAAGGTTC 8208 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || ||| ||| || || |||||||| | || ||||| Sbjct 8207 TGATACCATTGAAAATGTTAAAACAAAGATCCAAGATAAAGAAGGTATTCCACCCGATCA 8148 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||| | || |||| ||| || |||||||| |||||| | || | || || || Sbjct 8147 ACAACGTCTCATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACCTTATCTGACTATAA 8088 Query 106439 CATACAAAAAGAATCTACACTACATTTAGT 106468 ||||||||| ||||| || || |||||||| Sbjct 8087 CATACAAAAGGAATCAACTCTCCATTTAGT 8058 >seq30 Length=714265 Score = 105 bits (116), Expect = 5e-18 Identities = 150/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCA-TTACCGTGGAAACAGAACCCGG 106318 |||||||||||||| ||||| |||||||| || |||| ||||| ||||| ||| Sbjct 356320 ATGCAAATTTTTGTCAAAACCTTGACTGGTAAAACCAATTACCTTGGAAGTTGAAGGATC 356379 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| || ||| | || || || ||| || |||||||| | || ||||| Sbjct 356380 AGATACTATTGAGAATGTCAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCCGATCA 356439 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||||| ||||||| ||| || |||||||| |||||| | ||| | || ||||| Sbjct 356440 ACAAAGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGACTACAA 356499 Query 106439 CATACAAAAAGAATCTACACTACATTTAGT 106468 || ||||| ||||| || || |||||||| Sbjct 356500 TATTCAAAAGGAATCAACTCTCCATTTAGT 356529 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || | || || || ||||||||| ||||| ||| Sbjct 356549 ATGCAAATCTTTGTAAAGACTCTTACAGGTAAAACCATTACCTTGGAAGTTGAAGGATCA 356608 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || || || ||| || |||||||| | || || ||| Sbjct 356609 GATACTATTGAGAATGTTAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCCGACCAA 356668 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| || |||| ||| || |||||||| |||||| | ||| | || ||||| Sbjct 356669 CAAAGACTCATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTATCTGACTACAAT 356728 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTA 106469 || |||||||||||||| || ||||||||| Sbjct 356729 ATCCAAAAAGAATCTACTCTCCATTTAGTA 356758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402329335216832