Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq46 217 2e-51 >seq46 Length=277422 Score = 217 bits (240), Expect = 2e-51 Identities = 505/757 (67%), Gaps = 27/757 (4%) Strand=Plus/Plus Query 160963 AGCTTTAATCTCTGGTATAACTGGGCAGGATGGATCCTATCTTGCTGAACTTCTACTGAA 161022 ||| ||||| || ||||| ||||| || |||||||| ||| | | ||| ||||| | | Sbjct 47705 AGCATTAATTTCAGGTATTACTGGACAAGATGGATCATATTTAACAGAATTTCTATTAGA 47764 Query 161023 GAAGGGGTATGAAGTCCATGGTATTATTCGTAGAACCTCCTCGTTTAATACAGGAAGAAT 161082 || || ||| |||| |||||||||||| | ||| | || || |||||||| | ||||| Sbjct 47765 AAAAGGATATCAAGTTCATGGTATTATTAGAAGATCATCATCATTTAATACTAGTAGAAT 47824 Query 161083 CGATCATATCTTCGAT----------CAGTTACACC-----------TCCACTACGGGGA 161121 || ||| | | || ||| || | | ||||| || || Sbjct 47825 TGAACATTTATATCATGACAGACATACAGGTAAAGGAAAAATGATATTACACTATGGTGA 47884 Query 161122 TTTGACTGACTCCCTGAACATAGTCTCTATCATTAAGGAAGTAGAACCTGA-TGAGATCT 161180 ||| || |||||| || |||| ||||||| |||| ||||| | |||||| | Sbjct 47885 TTTAACAGACTCCACCAATTTAGTAGGTATCATTTCCAAAGT-GAACCCAACTGAGATTT 47943 Query 161181 ACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAGGAACCTGAATATACAGCAC 161240 | || || || |||||| |||||| ||||| ||| || |||||| ||||| Sbjct 47944 ATAATCTCGGAGCACAGTCTCATGTTAAAGTCAGTTTTGATATGAGTGAATACACAGCCA 48003 Query 161241 AGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTCTCCTA-GGTATGACA 161299 | || | ||| || || | | | || || ||||| || | ||| | | Sbjct 48004 ATGTAGACGGTCTTGGTTGTTTACGTATTCTCGATGCCATTCGT-TCATGTGGTTTAGAA 48062 Query 161300 GATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACA 161359 |||| || |||| || || || ||| || | ||||| ||||||||||| Sbjct 48063 GATAAAGTTAAATTCTATCAAGCCTCTACCTCAGAACTCTATGGAAAGGTACAAGAGATT 48122 Query 161360 CCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTAT 161419 || || ||||| |||||||| |||||||| || || |||| || || |||| | | Sbjct 48123 CCTCAATCTGAAACCACACCTTTTTACCCACGTTCCCCCTATGCAGTTGCCAAACAATTT 48182 Query 161420 GGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATT 161479 | ||||||||||| |||||||||||| |||| ||| |||| ||| ||||| Sbjct 48183 GCCTATTGGATTGTTGTAAACTACAGAGAGGCTTATAACATGTACGCATGTAACGGTATA 48242 Query 161480 CTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACTAGG 161539 |||||||||| ||||||||| || | ||| || || ||||| | || || ||||| Sbjct 48243 TTATTCAACCACGAGTCACCAAGAAGAGGTCCAACCTTTGTAACTAGAAAAATCACTAGA 48302 Query 161540 GGACTATCCCGTATTAGTACAGG-ACTACAGGATTGTCTATACCTAGGTAATCTAAACTC 161598 | | || ||| || ||| | ||| ||| || | ||||| | || | Sbjct 48303 TTTGTTGCTAAAGTTGCTACTGGTTCTA-AAGATACTCTCTATTTGGGTAACATCAATGC 48361 Query 161599 AAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAACA 161658 | ||| ||||||||||||||| ||||||||| ||||| |||||||| ||||||||||| Sbjct 48362 ACAACGTGATTGGGGTCATGCTAGAGACTATGTAGAGGCAATGTGGTTAATGTTACAACA 48421 Query 161659 GGAAACTCCTGATGACTATGTGATTGCCACAGGTAAA 161695 |||| || | |||| ||| ||||| || ||| || Sbjct 48422 AGAAAAACCACAAGACTTTGTCATTGCAACTGGTGAA 48458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729929107297520