Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 1e-12 >seq3 Length=1465623 Score = 89.7 bits (98), Expect = 1e-12 Identities = 273/409 (67%), Gaps = 20/409 (5%) Strand=Plus/Plus Query 332033 AGTTAATGCACTATCTTTCTCGATATTTTTACGATATTCATCATATGTTGTTGCACCAAT 332092 || ||||||| ||| || || |||| ||||||||||||| || ||| |||||||||| Sbjct 784443 AGCTAATGCAGGATCCTTTTCAATATATTTACGATATTCAGCAGTTGTAGTTGCACCAAC 784502 Query 332093 TACACGAATCTCACCACGTG-AAAGTGCTGGCTTAAGCATATTGCTCATGTCCATAGAAC 332151 | | | ||||| | | || || ||| || |||||||| || ||||| || Sbjct 784503 GCAATGTAGATCACCTCTAGCCAACTG-TGGTTTTAGCATATTACTAGCATCCATTCCAC 784561 Query 332152 CATTACTTGCGGAACCAGCCCCAACCATAATATGAATTTCATCAATGAAAACAATAGTA- 332210 | || | | | |||||| ||||||| | |||||| |||||| || |||||||| | Sbjct 784562 C-TTCC--ACAGCACCAGCACCAACCAAAGTATGAAGTTCATCTAT--AAACAATATAAC 784616 Query 332211 -TTTTCACGTTTCTTT---AGTTCTTTTAGCAAATTGTCGATGCGTTCTTCAAATTCACC 332266 | |||| | | | || ||||| || | | | | || | |||||||| ||||| Sbjct 784617 CTCACCACGATAATGTGCAAGATCTTTAAGAATACTCTTCATTCTCTCTTCAAAATCACC 784676 Query 332267 ACGATACTTAGTACCAGCAGTCAA---TGCACCAACATTTAGTGAAAG-AATTTCAACGT 332322 ||| |||| | ||||||| ||| || |||| || | || || | | || | Sbjct 784677 ACGGAACTTTGCACCAGCAACCAAACTTG--CCAA-ATCCAATGTTAGTACTCTCTTGTT 784733 Query 332323 CTTTCAGGTGTTCAGGTACGTTACCATCAGCAATAGCTTGTGCAAGCCCGTCGATGATTT 332382 |||| || |||||||| | |||| |||| || || | || || | ||| Sbjct 784734 CTTTATACTG-TCAGGTACATCCCCATTTACAATTCTCTGAGCTAAACCCTCTACGATAG 784792 Query 332383 GTGTTTTACCTACACCAGCTTCACCAGTGAGAATAGCATTCTTTTTGGT 332431 || ||||| ||||||| ||||||| |||||| | ||| || || || Sbjct 784793 CAGTCTTACCAACACCAGGTTCACCAATGAGAACTGGATTGTTCTTTGT 784841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113829629368592