Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq33 105 8e-18 >seq33 Length=884058 Score = 105 bits (116), Expect = 8e-18 Identities = 1088/1739 (63%), Gaps = 99/1739 (6%) Strand=Plus/Minus Query 117966 TCCGCCGCCATATCAATCACATC-CTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTT 118024 || || ||||||||||||| | ||| | || || ||||| || ||| |||| || | Sbjct 111979 TCAGCAGCCATATCAATCAAGGCTCTTTGT-TTAATCTCCCAAACTGTCTTGTAAAGTTG 111921 Query 118025 CTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCC---GCCTTGACCAT 118081 || | ||| ||||| || || |||||||| | || |||| || | | | | Sbjct 111920 TTTCAAATCCTCTGGAATCTCTGGAATATTTTGAACAGAACCACGGTGTGCTATAATCTT 111861 Query 118082 GAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTT 118141 | | |||| ||| ||||||| || |||| || | ||||| | | ||||| Sbjct 111860 G---TTTTTCAAGTCCATTGACCACAGTCCAAGCTCCATAAGATCAGAAAGCAATTGCTT 111804 Query 118142 ATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGG 118201 ||| | || ||| ||||| || | | | ||| ||| || || | |||||||| Sbjct 111803 ATTAATAATTGTAAATTCACCTGCTAAGACTCTTCTGGAATATATGTTACTAGTGTATGG 111744 Query 118202 CTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCAT 118261 ||||| |||||||||||| || ||||| ||||||||||||||||| || || || Sbjct 111743 TTCAAAAGCCTCATTGTTACCTAAAATTTGACTGGTGGAGGCTGTGGGCATTGGGGCTAT 111684 Query 118262 GAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAG-AGCGTCCCAGTCGT 118320 | ||| ||| | ||||| | || || ||||||||| | ||| | || Sbjct 111683 TAAAAGTGAGTTTCTAAGACCGTGTTTGGCGATATCTTCCTTGAGTTGTTTCCAATTCCA 111624 Query 118321 AGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCG 118380 | | || | | | | ||||||||| | ||||| |||||||| ||||| | Sbjct 111623 ACGATCGGTTGGAGTGACAC-CCCACATATCGTATTGGAGTATACCTTGACTTGCTGGAG 111565 Query 118381 ATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGA 118437 | || | |||| ||| || || || | || | || | ||| ||| | | Sbjct 111564 AACCTTGGAATGATGAATAGGGTCCATCCTTATGAGCGAGTTCTACTGAG-GCGCTT--A 111508 Query 118438 GGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA--TTGCCTTGGCCTCGTCGGA 118495 ||||| || || || || |||| | ||||| || || ||| || ||| Sbjct 111507 AAGCTGCAAAGTAGATAGTCTCGGAAATCTCAATATTCAATTTAGCTGCACCT-GT-GGA 111450 Query 118496 ATCAAACGCGAGTCG--GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 118553 ||||| | || || | | || || ||||| || |||||||| | ||| | ||| Sbjct 111449 TTCAAAAGGTAGACGAAGGGCTAA--GAAAACATCAGCAAGACCTTGAATACCAATACCA 111392 Query 118554 ATTGGGCGATGTCTCA---TATTAGACTTCCGAGCGGTCT-CCACGGGATAAAAATTCCT 118609 ||||| | || | | | ||| ||| ||| ||| || |||||| |||| || Sbjct 111391 ATTGGTCTGTGACGGAGGTTGCTAGTCTT---AGC-TTCTGGGACTGGATAATAATTTCT 111336 Query 118610 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC--ATGAAGC----TT 118663 ||| |||| | | || |||||| | || | || |||||| | ||| || |||| | Sbjct 111335 ATCAATAATCTTGTTGAGATTTCTAGTTATAATCTTTGTAACTTCATATAAAGCCTGATG 111276 Query 118664 TTCGTAATCAAA-----------ACTGCGAGTCT----------------CTTCATTGAC 118696 || | ||||| | | || ||| | || | | Sbjct 111275 ATCAAATTCAAAGGCTTTCTTATAATAAGATTCTGGATTGGTGTTAGGAACCTCTCTCAA 111216 Query 118697 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 118756 | |||| || | || || || || || ||||| || | | || || | ||||| Sbjct 111215 AAACTTTGGTAATGCAATAGAGGCAAGGTTACAAACTGCGACTTCCTCTGGAGATGTGTA 111156 Query 118757 CTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 118816 | ||||| || || ||||| || || |||||| |||||||||||||||||||| Sbjct 111155 TTGAATAATCTCAGTACACAAATTGGATGATGAAATGGTACCCAAGTTCTTTTGATTTGA 111096 Query 118817 CTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTT 118876 || ||||| ||||| ||||| || || || || || || || || |||| || | Sbjct 111095 TTTCTCATTACAAGCATCTTTGTAGAGAATATAAGGTGTACCAGTTTCAATTTGAGATTC 111036 Query 118877 GAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGC---CCCT---- 118929 | |||||| ||| | ||| ||| ||| || || || ||| Sbjct 111035 CACAATAGCAAACCACAAATCTTGAGCCTTAACA----ACTTTTCTAGCTAATCCTGGAG 110980 Query 118930 CTTCCTCGTACTTTGTG-TAGAGGGCTTCAAACTCTTCACCCACGGC-CTCTGAGAGCCC 118987 || || || |||| | || || | || || || ||| ||| ||||| ||| || Sbjct 110979 TTTGTTCATA-TTTGAGATAAAGTTTTCTGAATTCCTC-TCCATGGCACTCTGCGAGACC 110922 Query 118988 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAA 119047 ||| |||| || || || ||||| ||||| | || | ||| || | ||| || Sbjct 110921 TGGGGCCTCATTAGGACAAAAGAGGGACCAATCTTCATTTCCAGGAACACGTTCCATAAA 110862 Query 119048 GAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 119107 ||| || ||||| || || |||| | || ||| ||| ||||| | || || Sbjct 110861 GAGATCACAAATCCAAAGGGCATAGAATAAGTCACGAGCACGAATCTCTTCCTTACCATG 110802 Query 119108 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 119167 ||| | ||||| || || | || ||| |||||||| || || | ||| || || Sbjct 110801 ATTTTTCTTTAGATCCAAGAACTCAAAGACATCAGCGTGCCATGGCTCTAAGTATACTGC 110742 Query 119168 GATTGACCCCTTAC---GACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATAC 119224 | | || || | || || | |||| |||||| | |||||| |||||||||| Sbjct 110741 AAAAGCACCTTTTCTCTTACCGCCTCCTTGGTCTACATAACGAGCAGTGTCGTTAAATAC 110682 Query 119225 ACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATT 119284 ||| | |||||| | | ||||| ||| || || || || || ||| || | | Sbjct 110681 ACGTAACATTGGTACTAAACCATTGGAAGTTCCGTTAGTTCCACGGATATAGGATTGAGC 110622 Query 119285 GGCTCTGACATCGTG-GATGTGC-ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 119342 || | || ||| || || ||| |||||||| || || || | || || ||| Sbjct 110621 AGCAC-GA-ATCTTGTGAACTGCAATACCAATTCCACCAGCAGATTTACTAATCAATGCG 110564 Query 119343 CACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTT-ATTTGCGATGAGGAA 119401 || | | | | | ||||||| || || || || || | || ||||| | | ||| Sbjct 110563 CATTGTTTCAAAGTATCGTAGATACCGTCAATGGAATCCTCTTTCATTTG-AACCAAGAA 110505 Query 119402 GCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGAT 119461 || ||||| ||||| ||||||||||| ||||| | || || || || || | Sbjct 110504 ACAAGATGACATCTGAGGGAATGGTGTACCAGCATTGAACAATGTAGGAGTAGCATGAGT 110445 Query 119462 GAACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGT 119520 |||| || | ||| | ||| || || ||||| || | ||| | ||| || | Sbjct 110444 AAACA-ACTTCATGGAGAGCTTTTCATAAGTCTCAAAAGCAGCGTTCAAGTCAGTTCCAT 110386 Query 119521 GAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGA 119580 | ||||| || ||||| | ||| ||||| | ||| ||| |||||| | |||||||| || Sbjct 110385 GTATACCAATAGAGACTCTCATCAACATATGTTGAGGTCTTTCCACAATGATACCATTGA 110326 Query 119581 GCCTCTGGAGGTA-ACTCTTCTCCAAGGTCTTGAGACCAAA------ATAGCCAAAATC 119632 | || | || |||| ||||| ||||| | |||||| |||| ||||||| Sbjct 110325 TACGTTGCAAATATGATCTT-TCCAAAGTCTTAAAACCAAAGAAATCATAGTCAAAATC 110268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434782556240