Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq33 165 9e-36 seq10 91.5 2e-13 >seq33 Length=884058 Score = 165 bits (182), Expect = 9e-36 Identities = 1113/1756 (63%), Gaps = 95/1756 (5%) Strand=Plus/Plus Query 104147 GACTTTGGTTATTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGG 104205 |||| || || |||||| | || || | || |||| | ||| | ||||| || |||| Sbjct 110274 GACTATGATTTCTTTGGTTTTAAGACTTTGGA-AAGATCATATTTGCAACGTATCAATGG 110332 Query 104206 TGTCTTGATGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGA 104265 | || | |||||| || || | ||||| ||| | || | || ||||| ||||| Sbjct 110333 TATCATTGTGGAAAGACCTCAACATATGTTGATGAGAGTCTCTATTGGTATACATGGAAC 110392 Query 104266 AGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACG 104324 ||| | | ||| || ||||| || || ||| | ||| | || |||| | ||| | Sbjct 110393 TGACTTGAACGCTGCTTTTGAGACTTATGAAAAGCTCTCCATGAAGT-TGTTTACTCATG 110451 Query 104325 CAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTA 104384 | || || || | |||||||||||||||||| || || ||||| ||| ||| | Sbjct 110452 CTACTCCTACATTGTTCAATGCTGGTACACCATTCCCTCAGATGTCATCTTGTTTCTTGG 110511 Query 104385 TCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAA 104444 | | || ||||| || || |||||||||| | ||| | | | || || | Sbjct 110512 TTCAAATGAAAGAGGATTCCATTGACGGTATCTACGATACTTTGAAACAATGCGCATTGA 110571 Query 104445 TCTCAAAGTGGGCTGGGGGTATTGGGAT-GCACATC-CATGATGTGAGAGCCAATAAATC 104502 | || | ||||| || ||||| || ||| || || ||| | | | | |||| Sbjct 110572 TTAGTAAATCTGCTGGTGGAATTGGTATTGCAGTTCACAAGATTCGTGCTGC--TCAATC 110629 Query 104503 TCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAA 104562 ||| || || || || || || ||||| | | |||||| | || |||||||| Sbjct 110630 CTATATCCGTGGAACTAACGGAACTTCCAATGGTTTAGTACCAATGTTACGTGTATTTAA 110689 Query 104563 CGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTC---GAAAGGGATCTATCGCAGTCTA 104619 || ||| || || |||||| | |||| || || |||| || || | ||||| || Sbjct 110690 CGACACTGCTCGTTATGTAGACCAAGGAGGCGGTAAGAGAAAAGGTGCTTTTGCAGTATA 110749 Query 104620 TCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGA 104679 | |||||||||||||| ||| || | |||||| | || | || || ||| | Sbjct 110750 CTTAGAGCCATGGCACGCTGATGTCTTTGAGTTCTTGGATCTAAAGAAAAATCATGGTAA 110809 Query 104680 CGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGA 104738 || ||| || ||| || || | |||| || || |||||| |||||||| ||| Sbjct 110810 GGAAGAGATTCG-TGCTCGTGACTTATTCTATGCCCTTTGGATTTGTGATCTCTTTATGG 110868 Query 104739 AGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCT 104798 | | ||| | | || ||||||| ||||||||||| | |||| || |||||| Sbjct 110869 AACGTGTTCCTGGAAATGAAGATTGGTCCCTCTTTTGTCCTAATGAGGCCCCAGGTCTCG 110928 Query 104799 CCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTA-CACAAAGTACGAGGAAGA---AGG 104853 | || |||| ||| ||||| || | ||||| | |||| || || || ||| Sbjct 110929 CAGAGTGCCATGGA-GAGGAATTCAGAAAACTTTATCTCAAA-TATGAACAAACTCCAGG 110986 Query 104854 TCGGGCGACTGCGACGGTGCCA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAA 104911 || | | | | || | ||| ||| ||||| |||||| | | |||||| Sbjct 110987 ATTAGCTA--GAAAAGTTGTTAAGGCTCAAGATTTGTGGTTTGCTATTGTGGAATCTCAA 111044 Query 104912 ACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAA 104971 | || ||||||||||| || || || |||||||| || ||||| | || |||||| Sbjct 111045 ATTGAAACTGGTACACCTTATATTCTCTACAAAGATGCTTGTAATGAGAAATCAAATCAA 111104 Query 104972 AAGAATTTGGGTGTGAT--CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG 105029 ||||| |||||| || || | |||||| | ||||| || || | ||| ||| Sbjct 111105 AAGAACTTGGGTACCATTTCATCA--TCCAATTTGTGTACTGAGATTATTCAATACACAT 111162 Query 105030 ACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGG--- 105086 ||| || || || |||||||| || || || || | || |||| | || Sbjct 111163 CTCCAGAGGAAGTCGCAGTTTGTAACCTTGCCTCTATTGCATTACCAAAGTTTTTGAGAG 111222 Query 105087 ---------------ATCCAGAGACA------AAGACA---TTTGATTATGAAAAAC--- 105119 ||||||| | |||| | ||||| | ||| | | Sbjct 111223 AGGTTCCTAACACCAATCCAGAATCTTATTATAAGAAAGCCTTTGAATTTGATCATCAGG 111282 Query 105120 ---TCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176 | | |||||||| || | | | || | ||| || |||| ||||||||||||||| Sbjct 111283 CTTTATATGAAGTTACAAAGATTATAACTAGAAATCTCAACAAGATTATTGATAGAAATT 111342 Query 105177 TTTACCCCGTTG-AGACTGCTCGTAAATCTAATA---TGAGACACCGTCCAATTGGTCTC 105232 ||| || || ||| ||| || ||| | | | ||| | ||||||||| | Sbjct 111343 ATTATCCAGTCCCAGAA-GCT---AAGACTAGCAACCTCCGTCACAGACCAATTGGTATT 111398 Query 105233 GGTGTTCAGGGTCTCGCGGATGTATTCATT---CTTTGTCGCCACGCATTTGATTCCGAC 105289 ||| |||| ||||| || ||||| ||| | ||| ||| | | ||||| ||| || Sbjct 111399 GGTATTCAAGGTCTTGCTGATGTTTTCTTAGCCCTTCGTCTAC---CTTTTGAATCC-AC 111454 Query 105290 GAAGCGAAGGAAA--TCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG- 105346 | | | || || | ||| || | ||||| || || || ||| || || Sbjct 111455 -AGGTGCAGCTAAATTGAATATTGAGATTTCCGAGACTATCTACTTTGCAGCT-TTAAGC 111512 Query 105347 GCG--AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404 || ||| ||| | || | ||||| || ||| | | || | |||||||||| Sbjct 111513 GCCTCAGT--AGAACTCGCTCATAAGGATGGACCCTATTCATCATTCCAAGGTTCTCCAG 111570 Query 105405 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACT 105464 | ||||| | || |||| |||||||||| | | | |||| | | || | Sbjct 111571 CAAGTCAAGGTATACTCCAATACGATATGTGGGGTG-TCACTCCAACCGATCGTTGGAAT 111629 Query 105465 GGGAAGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 |||| | ||||||||| ||| | | |||||| | ||| || | || || Sbjct 111630 TGGAAACAACTCAAGGAAGATATCGCCAAACACGGTCTTAGAAACTCACTTTTAATAGCC 111689 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583 |||||||| |||||||||||| ||||| || ||||| ||||| |||||||| ||| Sbjct 111690 CCAATGCCCACAGCCTCCACCAGTCAAATTTTAGGTAACAATGAGGCTTTTGAACCATAC 111749 Query 105584 ACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT 105643 || | ||||| ||| |||||| | | || || || ||| ||| | || ||||| Sbjct 111750 ACTAGTAACATATATTCCAGAAGAGTCTTAGCAGGTGAATTTACAATTATTAATAAGCAA 111809 Query 105644 CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTG 105703 | | ||| || | ||| |||| || ||||| | ||| |||| | || | | Sbjct 111810 TTGCTTTCTGATCTTATGGAGCTTGGACTGTGGTCAATGGACTTGAAAAA---CAAGATT 111866 Query 105704 AAAGC---GGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTG 105760 | ||| ||||||| ||||||||||| || |||||| | || | || | | Sbjct 111867 ATAGCACACCGTGGTTCTGTTCAAAATATTCCAGAGATTCCAGAGGATTTGAAACAACTT 111926 Query 105761 TACCGCACAGTTTGGGAAATCAAGATGAAG-GATGTCATTGACATGGCCGCAGATCGTGG 105819 ||| ||||||||||| || || | ||| | | ||||| ||||| || || | || Sbjct 111927 TACAAGACAGTTTGGGAGATTAA-ACAAAGAGCCTTGATTGATATGGCTGCTGACAGAGG 111985 Query 105820 TCGCTTCATTGATCAA 105835 | || ||||| ||| Sbjct 111986 TGCTTTTATTGACCAA 112001 >seq10 Length=701017 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/122 (78%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 15878 AACACTTCCAGTTCCTATCGCAATTGAGACAACTCACAAAAGTTGTCATTGGTTCATCCG 15937 || ||||||| || || ||||||| ||| | ||||||||||||||||||||||| | Sbjct 152807 AAAACTTCCATTTGTGATTGCAATTGGTACATGTTACAAAAGTTGTCATTGGTTCATCTG 152866 Query 15938 CAGACCGAGTTTGAAGTTGATAATAGGT-TGTTTTCTTTGATTTACAGCGCGCACATGTG 15996 | || |||||||| | ||| ||||| | ||||||||| |||||| || ||||| || Sbjct 152867 CGGAACGAGTTTGCATTTGGTAATATTTACATTTTCTTTG-TTTACAACGACCACATTTG 152925 Query 15997 AA 15998 || Sbjct 152926 AA 152927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260406298960