Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq27 141 2e-28 seq38 136 9e-27 seq31 127 5e-24 seq12 127 5e-24 seq30 123 6e-23 >seq27 Length=1864556 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | |||||||||||| |||||||| ||||||||||| | | || || || Sbjct 1617721 TCTGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTATAATCAGATAATGTTCTACC 1617662 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| | || || || ||||| ||||| | |||||| || || |||| ||||| || Sbjct 1617661 GTCTTCTAATTGTTTACCAGCGAAAATAAGTCTTTGTTGATCGGGTGGAATACCTTCTTT 1617602 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || || || ||| || ||||| |||||||| || | |||||| || || || || Sbjct 1617601 GTCTTGAATTTTGGCTTTTACATTTTCAATGGTGTCTGAACCTTCAACTTCAAGGGTAAT 1617542 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | ||||||||||| | ||||| Sbjct 1617541 TGTTTTACCAGTTAAGGTCTTTACAAAAATTTGCAT 1617506 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || |||||||| |||||||| ||||| ||||| | ||||| | || Sbjct 1618177 TCTGAGAACTAAATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGAGAGGGTACGACC 1618118 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | || || || || ||||| | | ||||||||| || |||| ||||| || Sbjct 1618117 ATCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCGGGTGGAATACCTTCTTT 1618058 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || || || ||| || ||||| ||||| || || | |||||| || || || || Sbjct 1618057 GTCTTGAATTTTGGCTTTTACATTTTCAATGGTATCTGAACCTTCAACTTCAAGGGTAAT 1617998 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | ||||||||||| | ||||| Sbjct 1617997 AGTTTTACCAGTCAAGGTCTTTACAAAAATTTGCAT 1617962 Score = 120 bits (132), Expect = 7e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | |||||||||||| |||||||| |||||||| || | | || || || Sbjct 1695722 TCTGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTATAGTCGGATAAAGTTCTACC 1695781 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | || || || || || ||||| | ||||||||| || || | ||||| || Sbjct 1695782 ATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGGTCGGGTGGGATACCTTCTTT 1695841 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || || || ||| || ||||| || || || || | |||||| || || || || Sbjct 1695842 ATCTTGAATTTTGGCTTTTACATTTTCAATAGTATCTGAACCTTCAACTTCAAGGGTAAT 1695901 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | ||||| ||||| | ||||| Sbjct 1695902 TGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 1695937 Score = 118 bits (130), Expect = 2e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || |||||||||||||||||||| | ||| || | || ||||| | || || || Sbjct 1695969 GTTGATTCTTTTTGGATGTTATAATCGGAAAGAGTACGACCGTCTTCTAATTGTTTACCG 1696028 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 ||||| ||||| | ||||||||| || || | ||||| || || || || || || Sbjct 1696029 GCGAAAATAAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTATCTTGAATTTTGGCCTTT 1696088 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 |||||||| |||||||| |||| |||||| || | || || || || || || | || Sbjct 1696089 ACGTTTTCAATGGTGTCTGAGCCTTCAACTTCTAAGGTAATAGTTTTACCAGTTAAGGTT 1696148 Query 211098 TTTACAAACACCTGCATT 211115 || ||||| | |||||| Sbjct 1696149 TTAACAAAGATTTGCATT 1696166 Score = 114 bits (126), Expect = 3e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || || || || |||||||||||||| ||||| | ||| || | || Sbjct 1617949 TCTGAGTACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACC 1617890 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | || || || ||||| || || | ||||||||| || || | ||||| || Sbjct 1617889 ATCTTCTAATTGTTTACCGGCGAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTCTTT 1617830 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || || || || |||||||| |||||||| || | ||| || || | || || Sbjct 1617829 GTCTTGAATTTTAGCCTTTACGTTTTCAATGGTGTCGGAACCTTCTACTTCTAAGGTAAT 1617770 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | ||| || ||||| | ||||| Sbjct 1617769 GGTTTTACCAGTCAAAGTTTTAACAAAAATTTGCAT 1617734 >seq38 Length=878590 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| || || | || ||||| || |||||||||||||| ||||| | || || | Sbjct 148629 AGTCTGAGTACCAAATGGAGAGTTGATTCTTTTTGGATGTTGTAATCAGAGAGAGTACGA 148570 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||| | || || || || ||||| | ||||||||||| || || | ||||| Sbjct 148569 CCATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGGTCGGGTGGGATACCTTCT 148510 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || || ||||| || ||| || ||||||||||| ||||| | |||||| || || || Sbjct 148509 TTATCTTGGATTTTAGCTTTGACATTTTCGATGGTATCAGAACCTTCAACTTCAAGGGTA 148450 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || | ||||| ||||| | ||||| Sbjct 148449 ATGGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCAT 148412 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| || || | || || || || |||||||||||||| ||||| | ||| || | Sbjct 148857 AGTCTGAGTACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGA 148798 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||| | || || || ||||| || || | ||||||||| || || | ||||| Sbjct 148797 CCATCTTCTAATTGTTTACCGGCGAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTCT 148738 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || ||||| || |||||||| |||||||| || | |||||| || || || Sbjct 148737 TTGTCTTGAATCTTAGCCTTTACGTTTTCAATGGTGTCGGAACCTTCAACTTCAAGGGTA 148678 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || | ||||| ||||| | ||||| Sbjct 148677 ATGGTCTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 148640 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || ||||| || ||||| || |||||||| ||||| ||||| | ||| || | || Sbjct 149083 TCTAAGAACAAGATGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACC 149024 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | || || || || || || || | ||||||||| || || | ||||| || Sbjct 149023 ATCTTCTAATTGTTTACCAGCAAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTCTTT 148964 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || ||||| || ||| || ||||||||||| ||||| | |||||| || | || || Sbjct 148963 ATCTTGGATTTTGGCTTTGACATTTTCGATGGTATCAGAACCTTCAACTTCCAAGGTAAT 148904 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || | ||||| ||||| | ||||| Sbjct 148903 GGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCAT 148868 Score = 114 bits (126), Expect = 3e-20 Identities = 158/220 (72%), Gaps = 1/220 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| || || | || || || || |||||||||||||| ||||| | || || | Sbjct 148401 AGTCTGAGTACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCGGAGAGAGTACGA 148342 Query 210957 CCATCTTCCAGCTGCTTGCCT-GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||||| | || || || ||||| || || | |||||| || || || | ||||| Sbjct 148341 CCATCTTCTAATTGTTTACCGAGCGAAAATGAGTCTTTGTTGATCGGGTGGGATACCTTC 148282 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 || || ||||| || ||| || |||||||||||||| || | |||||| || || || Sbjct 148281 TTTATCTTGGATTTTGGCTTTGACATTTTCGATGGTGTCGGAACCTTCAACTTCTAGGGT 148222 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || || || | || || ||||| | |||||| Sbjct 148221 AATGGTTTTACCAGTTAATGTTTTAACAAAGATTTGCATT 148182 >seq31 Length=145395 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| || || | || ||||| || |||||||| || ||||| || | || || | Sbjct 8278 AGTCTGAGAACTAAATGGAGAGTTGATTCTTTTTGTATATTATAGTCAGAGAGAGTACGA 8337 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||| || || || || || ||||| | ||||||||| || |||| ||||| Sbjct 8338 CCATCTTCCAATTGTTTACCAGCAAAAATAAGTCTTTGTTGGTCGGGTGGAATACCTTCT 8397 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || || |||||||| ||| || || || ||||||||||| | |||||| || | || Sbjct 8398 TTATCTTGGATCTTGGTTTTAACATTCTCAATGGTGTCAGAACCTTCAACTTCTAAGGTA 8457 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || | || || ||||| | ||||| Sbjct 8458 ATTGTCTTACCAGTCAATGTTTTGACAAAGATTTGCAT 8495 Score = 125 bits (138), Expect = 2e-23 Identities = 164/226 (73%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 |||||| || || | || || || || |||||||| |||||||| || | | || | Sbjct 8505 AAGTCTGAGAACTAAATGTAGTGTTGATTCTTTTTGAATGTTATAGTCAGATAAAGTACG 8564 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||||||| || || || || || ||||| | ||||||||| || || | || || Sbjct 8565 ACCATCTTCCAATTGTTTACCAGCAAAAATAAGTCTTTGTTGGTCGGGTGGGATACCCTC 8624 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 || || ||||| || ||| || ||||| ||||| ||||| | ||| ||||| | || Sbjct 8625 TTTATCTTGGATTTTGGTTTTAACATTTTCAATGGTATCAGAACCTTCTACCTCTAAGGT 8684 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT--TTTAT 211119 || ||||| || || | |||||||||||| | ||||| ||||| Sbjct 8685 AATTGTCTTACCAGTCAAAGTCTTTACAAATATTTGCATAATTTAT 8730 >seq12 Length=1224149 Score = 127 bits (140), Expect = 5e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 |||||| ||||| | || || || || ||||||||||| || ||||| | ||||| | Sbjct 427409 AAGTCTGAGGACTAAATGGAGGGTTGATTCTTTTTGGATATTGTAATCAGAGAGGGTACG 427350 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 || ||||| | || || || || |||||||| | |||||| || || || | ||||| Sbjct 427349 ACCGTCTTCTAATTGTTTACCGGCAAAGATAAGTCTTTGTTGATCGGGTGGGATACCTTC 427290 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 ||||| ||||| || || || ||||||||||| || || | |||||| || | || Sbjct 427289 TTTGTCTTGGATTTTGGCCTTGACATTTTCGATGGTATCTGAACCTTCAACTTCTAAGGT 427230 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118 || ||||| || || | ||| || || || | ||||||| || Sbjct 427229 AATGGTCTTACCAGTTAAAGTTTTAACGAAAATCTGCATTCTA 427187 >seq30 Length=714265 Score = 123 bits (136), Expect = 6e-23 Identities = 163/225 (72%), Gaps = 1/225 (0%) Strand=Plus/Minus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 ||||||||| || | || ||||| || ||||||||||| || || || | ||| || | Sbjct 356310 AAGTCTTAGAACTAAATGGAGAGTTGATTCTTTTTGGATATTGTAGTCAGAAAGAGTACG 356251 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||||||| || || || || || || || ||||||||||| || || | ||||| Sbjct 356250 ACCATCTTCCAATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCGGGTGGGATACCTTC 356191 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 || || |||||||| || || || || || || ||||| | ||| ||||| | || Sbjct 356190 TTTATCTTGGATCTTGGTCTTAACATTCTCTATAGTATCAGAACCTTCTACCTCCAAGGT 356131 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT-TTAT 211119 || || || || || | ||| || ||||| | |||||| |||| Sbjct 356130 AATTGTTTTACCTGTCAAAGTTTTAACAAAAATTTGCATTATTAT 356086 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 |||||| || || | || || || || ||||||||||| || ||||| | || || | Sbjct 370262 AAGTCTGAGTACTAAATGGAGGGTAGATTCTTTTTGGATATTGTAATCAGAGAGAGTACG 370203 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 || ||||||| || || || |||||||| | |||||||| || || || | ||||| Sbjct 370202 ACCGTCTTCCAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCGGGTGGGATACCTTC 370143 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 ||||| ||||| || || |||||||||||||| || || | ||| || || | || Sbjct 370142 TTTGTCTTGGATTTTGGCCTTGACGTTTTCGATGGTATCTGAACCTTCGACTTCTAAGGT 370083 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || || || | ||| || ||||| | ||||| Sbjct 370082 GATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 370044 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 |||||| || || | || ||||| || ||||||||||| || || || | | || | Sbjct 356767 AAGTCTGAGTACTAAATGGAGAGTAGATTCTTTTTGGATATTGTAGTCAGATAAAGTACG 356708 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||||||| || || || || || || || | ||||||||| || || | ||||| Sbjct 356707 ACCATCTTCCAATTGTTTACCAGCAAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTC 356648 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 || || || ||||| || || || || || || || || | |||||| || | || Sbjct 356647 TTTATCTTGAATCTTGGTCTTAACATTCTCAATAGTATCTGATCCTTCAACTTCCAAGGT 356588 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || |||||||||||||| | ||||| Sbjct 356587 AATGGTTTTACCTGTAAGAGTCTTTACAAAGATTTGCAT 356549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151198011710