Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq27 141 6e-29 seq30 111 1e-19 seq38 107 1e-18 seq12 104 2e-17 seq31 102 6e-17 >seq27 Length=1864556 Score = 141 bits (156), Expect = 6e-29 Identities = 176/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 23597 ATTAATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCG 23656 ||||| || ||||||||| ||||| |||||||| | || || ||||| || || | | Sbjct 1617264 ATTAAATATATAAAATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACTATTACCTTAG 1617323 Query 23657 AAGTTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTG 23716 |||| || | ||||| |||||| | ||| |||||| || ||||||||| Sbjct 1617324 AAGTCGAAGGTTCCGACACCATTGAAAATGTCAAAGCCAAAATTCAAGATAAAGAAGGTA 1617383 Query 23717 TACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTT 23776 | || || |||||||| | ||||| |||||||| |||||| | ||||| | || ||| Sbjct 1617384 TTCCACCCGATCAACAAAGATTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTC 1617443 Query 23777 TAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAG 23836 | ||||||||||| |||||||| || |||||||||||||| | || || |||| | Sbjct 1617444 TCTCTGATTACAACATTCAAAAAGAATCAACATTACATTTAGTACTCAGATTAAGAGGTG 1617503 Query 23837 G 23837 | Sbjct 1617504 G 1617504 Score = 132 bits (146), Expect = 3e-26 Identities = 176/242 (73%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 23597 ATTAATTACTTAA-AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTC 23655 |||||| | |||| |||||| || || ||||||||| | || || ||||| || || | Sbjct 1696179 ATTAAT-ATTTAATAATGCAAATCTTTGTTAAAACCTTAACTGGTAAAACTATTACCTTA 1696121 Query 23656 GAAGTTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGT 23715 |||||||| | | ||||| |||||| |||| |||||| || ||||||||| Sbjct 1696120 GAAGTTGAAGGCTCAGACACCATTGAAAACGTAAAGGCCAAAATTCAAGATAAAGAAGGT 1696061 Query 23716 GTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACT 23775 | || || || ||||| | | || || ||||| |||||| | ||||||| || ||| Sbjct 1696060 ATCCCACCCGACCAACAAAGACTTATTTTCGCCGGTAAACAATTAGAAGACGGTCGTACT 1696001 Query 23776 TTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGA 23835 | |||||| ||||| |||||||| || |||||||||||||| | || || |||| Sbjct 1696000 CTTTCCGATTATAACATCCAAAAAGAATCAACATTACATTTAGTACTCAGATTAAGAGGT 1695941 Query 23836 GG 23837 || Sbjct 1695940 GG 1695939 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || ||| | || || ||||| || || || |||||||| | Sbjct 1617962 ATGCAAATTTTTGTAAAGACCTTGACTGGTAAAACTATTACCCTTGAAGTTGAAGGTTCA 1618021 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| ||||| |||||| |||||||||||| | || || || ||| Sbjct 1618022 GATACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCACCCGACCAA 1618081 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | ||||| |||||||| |||||| | ||||| | || || | ||||||||| Sbjct 1618082 CAAAGATTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACCCTCTCTGATTACAAC 1618141 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| ||||| | ||||||||| | || || |||| || Sbjct 1618142 ATTCAAAAAGAATCCACTCTCCATTTAGTTCTCAGATTAAGAGGTGG 1618188 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || ||| | || || ||||| || || || |||||||| | Sbjct 1617506 ATGCAAATTTTTGTAAAGACCTTAACTGGTAAAACAATTACCCTTGAAGTTGAAGGTTCA 1617565 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| ||||| |||||| |||||||||||| | || || |||||| Sbjct 1617566 GACACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCACCCGATCAA 1617625 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | | || || || || |||||| | ||||||| | || ||| ||||| ||| Sbjct 1617626 CAAAGACTTATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACATTATCTGATTATAAC 1617685 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| ||||| | || || ||| | || || |||| || Sbjct 1617686 ATTCAAAAAGAATCCACTCTTCACTTGGTTCTCAGATTAAGAGGTGG 1617732 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| |||||||| | || || ||||| || || | ||||| || | Sbjct 1617734 ATGCAAATTTTTGTTAAAACTTTGACTGGTAAAACCATTACCTTAGAAGTAGAAGGTTCC 1617793 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| |||| |||||| |||||||||||| | || || || ||| Sbjct 1617794 GACACCATTGAAAACGTAAAGGCTAAAATTCAAGACAAAGAAGGTATCCCACCCGACCAA 1617853 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | | || || ||||| |||||| | ||||| | || ||| | ||||||||| Sbjct 1617854 CAAAGACTCATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 1617913 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| || || | |||||||| | || || |||| || Sbjct 1617914 ATCCAAAAAGAATCAACCCTCCATTTAGTACTCAGATTAAGAGGTGG 1617960 >seq30 Length=714265 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || |||||||| | || || ||||| ||||| | ||||| || | Sbjct 370044 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATCACCTTAGAAGTCGAAGGTTCA 370103 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | |||| | || ||||| |||||||||||| | || || |||||| Sbjct 370104 GATACCATCGAAAACGTCAAGGCCAAAATCCAAGACAAAGAAGGTATCCCACCCGATCAA 370163 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || |||||||| || ||||| |||||| ||||||||| || ||| | |||||||| Sbjct 370164 CAACGTTTAATCTTCGCCGGTAAACAATTGGAAGACGGTCGTACTCTCTCTGATTACAAT 370223 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || |||||||| || || | |||||||| Sbjct 370224 ATCCAAAAAGAATCTACCCTCCATTTAGT 370252 >seq38 Length=878590 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||| ||| | || || || || || || || |||||||| | Sbjct 148412 ATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACCATTACCCTTGAAGTTGAAGGTTCT 148471 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | |||| | ||| ||||| || ||||||||| | || || || ||| Sbjct 148472 GATACCATCGAAAATGTCAAAGCTAAAATCCAAGATAAAGAAGGTATCCCACCCGACCAA 148531 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || |||||||| |||||||| |||||| | ||||| | || ||| | ||||||||| Sbjct 148532 CAACGTTTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGATTACAAC 148591 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| || || | ||||| || | || | ||||||| Sbjct 148592 ATCCAAAAAGAATCAACTCTCCATTTGGTACTCAGACTCAGAGGAGG 148638 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||| ||| | || || || || || || || |||||||| | Sbjct 148640 ATGCAAATTTTTGTTAAGACCTTAACTGGTAAGACCATTACCCTTGAAGTTGAAGGTTCC 148699 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| |||| || ||| |||||||||||| | || || || ||| Sbjct 148700 GACACCATTGAAAACGTAAAGGCTAAGATTCAAGACAAAGAAGGTATCCCACCCGACCAA 148759 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | | || || ||||| |||||| | ||||| | || ||| | ||||||||| Sbjct 148760 CAAAGACTCATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 148819 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || |||||||| || || | ||||| || Sbjct 148820 ATCCAAAAAGAATCAACCCTCCATTTGGT 148848 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || |||||||| | || || ||||| || || || |||||||| | Sbjct 148182 AATGCAAATCTTTGTTAAAACATTAACTGGTAAAACCATTACCCTAGAAGTTGAAGGTTC 148241 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | |||| | ||| ||||| || ||||||||| | || || ||||| Sbjct 148242 CGACACCATCGAAAATGTCAAAGCCAAAATCCAAGATAAAGAAGGTATCCCACCCGATCA 148301 Query 23730 ACAGCGTTTAATATTTGC-CGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 ||| | | || || || ||| |||||| | ||||| | || ||| | |||||||| Sbjct 148302 ACAAAGACTCATTTTCGCTCGGTAAACAATTAGAAGATGGTCGTACTCTCTCCGATTACA 148361 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGT 23819 |||| |||||||| || || | ||||| || Sbjct 148362 ACATCCAAAAAGAATCAACCCTCCATTTGGT 148392 >seq12 Length=1224149 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 23603 TACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTG 23662 ||| || ||||||||||||||||||||| | || || || || || || | ||||||| Sbjct 427183 TACGTAGAATGCAGATTTTCGTTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTG 427242 Query 23663 ACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGC 23722 | | || || | |||| | || ||||| |||||||||||| | || | Sbjct 427243 AAGGTTCAGATACCATCGAAAATGTCAAGGCCAAAATCCAAGACAAAGAAGGTATCCCAC 427302 Query 23723 CAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCG 23782 | |||||||| | | || |||||||| |||||| | ||||||| || || | | Sbjct 427303 CCGATCAACAAAGACTTATCTTTGCCGGTAAACAATTAGAAGACGGTCGTACCCTCTCTG 427362 Query 23783 ATTACAACATACAAAAAGAGTCCACATTACATTTAGT 23819 ||||||| || |||||||| || || | |||||||| Sbjct 427363 ATTACAATATCCAAAAAGAATCAACCCTCCATTTAGT 427399 >seq31 Length=145395 Score = 102 bits (112), Expect = 6e-17 Identities = 152/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTC-ACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||| |||| || |||| | | || || || || || ||| | |||||||| | Sbjct 8267 ATGCAATTTTTTGTCAAAAACATTGACTGGTAAGACAATTACTTTGGAAGTTGAAGGTTC 8208 Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||||| | |||||||||| | | || ||||||||| | || || |||| Sbjct 8207 TGATACCATTGAAAATGTTAAAACAAAGA-TCCAAGATAAAGAAGGTATTCCACCCGATC 8149 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| ||| | || ||||| || |||||| ||||||| | || || ||| || || | Sbjct 8148 AACAACGTCTCATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACCTTATCTGACTATA 8089 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820 |||||||||| || || || | ||||||||| Sbjct 8088 ACATACAAAAGGAATCAACTCTCCATTTAGTT 8057 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| | || || || || || ||| | |||||||| | Sbjct 8038 ATGCAAATCTTTGTCAAAACATTGACTGGTAAGACAATTACTTTGGAAGTTGAAGGTTCT 7979 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| |||| |||||| |||||||||||| | || || || ||| Sbjct 7978 GATACCATTGAAAATGTAAAGACCAAAATTCAAGACAAAGAAGGTATCCCACCCGACCAA 7919 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | | || ||||| || |||||||| || || | || ||| | ||||||||| Sbjct 7918 CAAAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTCTCTCTGATTACAAC 7859 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || |||||||| || ||| | ||||||||| Sbjct 7858 ATTCAAAAAGAATCAACACTCCATTTAGTT 7829 Score = 87.8 bits (96), Expect = 1e-12 Identities = 104/140 (74%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 23681 AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAA 23740 |||| ||||||| |||| | || ||||| ||| | || || || ||||| | | | Sbjct 8652 AAATGTTAAAACCAAAA-TCCAAGATAAAGAGGGTATCCCACCCGACCAACAAAGACTTA 8594 Query 23741 TATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAG 23800 | ||||| || |||||| ||||||| | || |||||| || || ||||| ||||||| Sbjct 8593 TTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTATCTGACTATAACATTCAAAAAG 8534 Query 23801 AGTCCACATTACATTTAGTT 23820 | || ||| ||||||||||| Sbjct 8533 AATCAACACTACATTTAGTT 8514 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| | || || || || || || | |||||||| | Sbjct 8495 ATGCAAATCTTTGTCAAAACATTGACTGGTAAGACAATTACCTTAGAAGTTGAAGGTTCT 8436 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| ||||||| || | | || ||||||||| | || || || || Sbjct 8435 GACACCATTGAGAATGTTAAAACCAAGA-TCCAAGATAAAGAAGGTATTCCACCCGACCA 8377 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || |||||| ||||||| | || ||| | || || || Sbjct 8376 ACAAAGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGACTATAA 8317 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||||||||||| || || | ||||||||| Sbjct 8316 TATACAAAAAGAATCAACTCTCCATTTAGTT 8286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009377547432