Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq27 118 9e-22 seq12 86.0 5e-12 seq38 84.2 2e-11 >seq27 Length=1864556 Score = 118 bits (130), Expect = 9e-22 Identities = 167/233 (72%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 101008 ATTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATC 101067 ||| || |||| ||||| | |||| ||| | ||| |||||||||||||| || || || Sbjct 1695707 ATTACCACCTCTTAATCTGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTATAGTC 1695766 Query 101068 GGCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTAC 101127 || | |||| | |||||| |||||||| || ||| | ||||| ||||||||||| Sbjct 1695767 GGATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGGTCGGG 1695826 Query 101128 GGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGT 101187 || | |||||||| || |||||| ||| |||| | | || || || || | Sbjct 1695827 TGGGATACCTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATAGTATC--TGAACCT 1695884 Query 101188 T--GTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 | ||| | |||||| ||||| || || || || |||| |||||||||||| Sbjct 1695885 TCAACTTCAAGGGTAATTGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 1695937 Score = 109 bits (120), Expect = 4e-19 Identities = 194/279 (70%), Gaps = 13/279 (5%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||||| | || | || || ||||||||||||||||| |||||||| | Sbjct 1617504 CCACCTCTTAATCTGAGTACTAAATGTAATGTTGATTCTTTTTGAATGTTGTAATCAGAG 1617445 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| |||||| |||||||| || ||| | || | |||||||| || || Sbjct 1617444 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGATCGGGTGGA 1617385 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189 | |||||||| || |||||| ||| |||| | | || || | || || Sbjct 1617384 ATACCTTCTTTATCTTGAATTTTGGCTTTGACATTTTCAATGGTGTC--GGAACCTTCGA 1617327 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATTACAATAT 101249 ||| | |||||||||||| || || || ||||||| ||||||||||||| | |||| Sbjct 1617326 CTTCTAAGGTAATAGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCATTTT----ATAT 1617271 Query 101250 ATTTTTTACTTTGTATATA----TATGTAATGACTTTAA 101284 |||| || ||||||| || || |||||| ||||| Sbjct 1617270 ATTTAATA-TTTGTATCTAAAATAATTTAATGATTTTAA 1617233 Score = 104 bits (114), Expect = 2e-17 Identities = 176/250 (70%), Gaps = 10/250 (4%) Strand=Plus/Minus Query 100995 TACAGTTATTACT--ATTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTT 101052 |||| || ||| | ||| || |||| ||||| | || | || | ||| |||||||| Sbjct 1618207 TACAATTTTTATTTAATTACCACCTCTTAATCTGAGAACTAAATGGAGAGTGGATTCTTT 1618148 Query 101053 TTGAATATTGTAATCGGCCATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATA 101110 |||||| |||||||| | | || | || |||||| |||||||| || ||| | || Sbjct 1618147 TTGAATGTTGTAATCAG--AGAGGGTACGACCATCTTCTAATTGTTTACCGGCAAAGATT 1618090 Query 101111 AGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCC 101170 | ||||||||||| || | ||||||||||| |||||| ||| |||| | Sbjct 1618089 AATCTTTGTTGGTCGGGTGGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCA 1618030 Query 101171 ACCGTCTCTGTGGACGTTGT--TTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAA 101228 | || |||| || || ||| | |||||||||||| || ||||| || || | || Sbjct 1618029 ATGGTATCTGA--ACCTTCAACTTCAAGGGTAATAGTTTTACCAGTCAAGGTCTTTACAA 1617972 Query 101229 AAATTTGCAT 101238 |||||||||| Sbjct 1617971 AAATTTGCAT 1617962 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||||| | |||| ||| | ||| |||||||||||||| || ||||| | Sbjct 1617732 CCACCTCTTAATCTGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTATAATCAGAT 1617673 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| | ||||| |||||||| || || | ||||| |||||||| || || Sbjct 1617672 AATGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATAAGTCTTTGTTGATCGGGTGGA 1617613 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189 | ||||||||||| |||||| ||| |||| | | || || || || || Sbjct 1617612 ATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTGTC--TGAACCTTCAA 1617555 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | |||||| ||||| || || || || || | |||||||||||| Sbjct 1617554 CTTCAAGGGTAATTGTTTTACCAGTTAAGGTCTTTACAAAAATTTGCAT 1617506 >seq12 Length=1224149 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/222 (70%), Gaps = 11/222 (5%) Strand=Plus/Minus Query 101042 GTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAA--TCTTCCAATTGTTTGC 101099 |||||||||||||| ||||||||||| | | || | || ||||| |||||||| | Sbjct 427387 GTTGATTCTTTTTGGATATTGTAATCAG--AGAGGGTACGACCGTCTTCTAATTGTTTAC 427330 Query 101100 CCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTT 101159 | ||| | ||||| |||||||| || || | ||||||||||| ||||| | Sbjct 427329 CGGCAAAGATAAGTCTTTGTTGATCGGGTGGGATACCTTCTTTGTCTTGGATTTTGGCCT 427270 Query 101160 TCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGTTTTGCCCGTCAA 101217 | |||| | | || || || || || ||| | |||||| || || || || || Sbjct 427269 TGACATTTTCGATGGTATC--TGAACCTTCAACTTCTAAGGTAATGGTCTTACCAGTTAA 427212 Query 101218 TGTTTTAATAAAAATTTGCATTAT---TACAATATATTTTTT 101256 ||||||| ||||| |||||| | ||| |||||| |||| Sbjct 427211 AGTTTTAACGAAAATCTGCATTCTACGTACTATATATATTTT 427170 >seq38 Length=878590 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 101009 TTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCG 101068 || || |||| ||||| | || | || | ||| |||||||||||||| |||||||| Sbjct 149097 TTACCTCCTCTTAATCTAAGAACAAGATGGAGAGTAGATTCTTTTTGAATGTTGTAATCA 149038 Query 101069 GCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACG 101128 | | ||| |||||| |||||||| || ||| | || || ||||||||||| Sbjct 149037 GAAAGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATGAGTCTTTGTTGGTCGGGT 148978 Query 101129 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT 101188 || | |||||||| || ||||| ||| |||| | | || || | || || Sbjct 148977 GGGATACCTTCTTTATCTTGGATTTTGGCTTTGACATTTTCGATGGTATC--AGAACCTT 148920 Query 101189 --GTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | |||||| || || || ||||| || |||| ||| |||||||| Sbjct 148919 CAACTTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCAT 148868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409660530391986