Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq33 237 2e-57 seq36 188 1e-42 >seq33 Length=884058 Score = 237 bits (262), Expect = 2e-57 Identities = 1103/1730 (64%), Gaps = 73/1730 (4%) Strand=Plus/Minus Query 76922 TTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTC 76981 ||| || || ||||| ||||| ||||| ||||| | || | || |||| ||| || Sbjct 112001 TTGGTCAATAAAAGCACCTCTGTCAGCAGCCATATCAATCAAGGCTCTTTGTTTAATCTC 111942 Query 76982 CCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGA 77038 ||||| || ||| ||| |||||| | ||| ||||||| | || ||||||||| || Sbjct 111941 CCAAACTGTCTTGTAAAGTTGTTTCAAATCCTCTGGAATCTCTGGAATATTTTGAACAGA 111882 Query 77039 ACCACCATCTGATATAATTGTATTCTTTATATCATCATT--CCACAATTTCCTCTCTGTT 77096 ||||| | || |||||| | || || | || |||| ||||| | ||| | Sbjct 111881 ACCACGGTGTGCTATAATCTTGTTTTTCAAGTC--CATTGACCACAGTCCAAGCTCCATA 111824 Query 77097 AAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTG 77156 | | | ||| | || ||||| ||| |||||| || | || ||||| | | Sbjct 111823 AGATCAGAAAGCAATTGCTTATTAATAATTGTAAATTCACCTGCTAAGACTCTTCTGGAA 111764 Query 77157 TAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAA 77216 || || ||||| || |||||||| | || |||||||| || ||||||||| || || Sbjct 111763 TATATGTTACTAGTGTATGGTTCAAAAGCCTCATTGTTACCTAAAATTTGACTGGTGGAG 111704 Query 77217 GCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCT 77276 || || ||||| || || | || | ||||| ||||| ||| | ||| | || Sbjct 111703 GCTGTGGGCATTGGGGCTATTAAAAGTGAGTTTCTAAGACCGTGTTTGGCGATATCTTCC 111644 Query 77277 TTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGA 77336 || || | |||||||| |||| |||| | || ||| |||| | ||||||||| || Sbjct 111643 TTGAGTTGTTTCCAATTCCAACGATCGGTTGGAGTGACACCCCACATATCGTATTGGAGT 111584 Query 77337 ATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGT 77396 || || | ||| || || || | ||| | ||| ||||| || | | ||| ||| Sbjct 111583 ATACCTTGACTTGCTGGAGAACCTTGGAATGATGAATAGGGTCCATCCTTATGAGCGAGT 111524 Query 77397 TC-ACA-ACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT 77454 || || | ||||| || ||| | | || || || ||| |||||| |||| | || Sbjct 111523 TCTACTGAGGCGCTT--AAAGCTGCAAAGTAGATAGTCTCGGAAATCTCAATATTCA-AT 111467 Query 77455 CTTG-TGCTTCAATACTATCAAACGGATAATGTAAAAGAATAA--AGGCATCTGCTAATC 77511 | | ||| | | ||||| || | | || | ||| | |||| || | | Sbjct 111466 TTAGCTGCACCTGTGGATTCAAAAGGTAGACG--AAGGGCTAAGAAAACATCAGCAAGAC 111409 Query 77512 CCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAG 77571 | |||| ||||||||||| ||||| || | ||| | | ||||||||||| | | Sbjct 111408 CTTGAATACCAATACCAATTGGTCTGTGACGGAGGTTGCTAGTCTTAGCTTCTGGGACTG 111349 Query 77572 GATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCT 77631 |||||||||| | || ||||| || |||||||||||| | | || || || | Sbjct 111348 GATAATAATTTCTATCAATAATCTTGTTGAGATTTCTAGTTATAATCTTTGTAACTTCAT 111289 Query 77632 TTA------GTTTAAGAAAATCAAAT-CTTCCATCTA-TAACA----------------- 77666 || | | | ||| ||||| ||| | | || ||| | Sbjct 111288 ATAAAGCCTGATGATCAAATTCAAAGGCTTTCTTATAATAAGATTCTGGATTGGTGTTAG 111229 Query 77667 -AACATGT-TCAAA------------GCTATAGATGCTAGATTACAAACTGCTACCTCAT 77712 ||| | | ||||| || ||||| || || ||||||||||| || || | Sbjct 111228 GAACCTCTCTCAAAAACTTTGGTAATGCAATAGAGGCAAGGTTACAAACTGCGACTTCCT 111169 Query 77713 -TAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGA 77771 | | | || ||||| || ||||| ||||| | ||| || || || |||| Sbjct 111168 CTGGAGATGTG-TATTGAATAATCTCAGTACACAAATTGGATGATGAAATGGTACCCAAG 111110 Query 77772 TTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTT 77831 || | ||| || || | ||| || | || || || |||||| | || || || ||| Sbjct 111109 TTCTTTTGATTTGATTTCTCATTACAAGCATCTTTGTAGAGAATATAAGGTGTACCAGTT 111050 Query 77832 TCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTAT 77891 ||||| || ||||| | ||||| ||| | || ||| || | || | ||| || Sbjct 111049 TCAATTTGAGATTCCACAATAGCAAACCACAAATCTTGAGCCTTAA-CA-ACTTTTCTAG 110992 Query 77892 CGCCTCTC-----TCTTTCATATT-GAGTATATAGCCGTTCAAATTCATCTCCCCAAACA 77945 | || | |||||||| ||| ||| || | ||||| ||||| Sbjct 110991 CTAATCCTGGAGTTTGTTCATATTTGAG-ATAAAGTTTTCTGAATTCCTCTCCATGGCAC 110933 Query 77946 TCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACT 78005 || | | || ||| ||||| || || | | ||||| || ||| | | ||| Sbjct 110932 TCTGCGAGACCTGGGGCCTCATTAGGACAAAAGAGGGACCAATCTTCATTTCCAGGAACA 110873 Query 78006 CGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCT 78065 |||| ||||||||||||| ||||| || ||| |||| || || | | | ||| Sbjct 110872 CGTTCCATAAAGAGATCACAAATCCAAAGGGCATAGAATAAGTCACGAGCACGAATCTCT 110813 Query 78066 TCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCT 78125 || || || ||| || || ||||| | ||||| | | ||||| |||||||| ||| Sbjct 110812 TCCTTACCATGATTTTTCTTTAGATCCAAGAACTCAAAGACATCAGCGTGCCATGGCTCT 110753 Query 78126 AGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTG 78185 | |||| ||| | | | || || ||| ||||| || |||| ||| | || ||| Sbjct 110752 AAGTATACTGCAAAAGCACCTTTTCTCTTACCGCCTCCTTGGTCTACATAACGAGCAGTG 110693 Query 78186 TTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATA 78245 | ||| | || | |||||||| | | ||| || || ||||| || |||||| ||| Sbjct 110692 TCGTTAAATACACGTAACATTGGTACTAAACCATTGGAAGTTCCGTTAGTTCCACGGATA 110633 Query 78246 TAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGAT 78305 || | | || ||||| || || | || || ||||| || || ||| Sbjct 110632 TAGGATTGAGCAGCACGAATCTTGTGAACTGCAATACCAATTCCACCAGCAGATTTACTA 110573 Query 78306 ATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTA 78365 || | ||||| ||||||| |||||||||||||| || || || || |||| | | Sbjct 110572 ATCAATGCGCATTGTTTCAAAGTATCGTAGATACCGTCAATGGAATCCTCTTTCATTTGA 110513 Query 78366 A-GAAGAAAACAGCTAGACATTTGATG--ATGAACAGTTCCTGCATTAAATAATGTCGGA 78422 | |||||| || | ||||| ||| | ||| || || ||||| || ||||| ||| Sbjct 110512 ACCAAGAAACAAGAT-GACATCTGAGGGAATG--GTGTACCAGCATTGAACAATGTAGGA 110456 Query 78423 GATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATG 78482 | ||||| |||||| | || || || | || || |||| ||| | | | | Sbjct 110455 GTAGCATGAGTAAACAACTTCATGGAGAGCTTTTCATAAGTCTCAAAAGCAGCGTTCAAG 110396 Query 78483 TCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTC 78542 || | ||| || || | | || | |||||||||||| ||||||||||| || | Sbjct 110395 TCAGTTCCATGTATACCAATAGAGACTCTCATCAACATATGTTGAGGTCTTTCCACAATG 110336 Query 78543 TTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAA 78592 || ||| || ||| |||||| |||||||||| ||||||||||| Sbjct 110335 ATACCATTGATACGTTGCAAATATGATCTTTCCAAAGTCTTAAAACCAAA 110286 >seq36 Length=2033623 Score = 188 bits (208), Expect = 1e-42 Identities = 221/296 (75%), Gaps = 7/296 (2%) Strand=Plus/Minus Query 48436 TTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGA 48495 |||| || |||||||||||||| || || || || || || |||||||| ||||||| | Sbjct 729763 TTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTGGTA 729704 Query 48496 TCTGTACCTCCGTACAAAATC--GTTCAGCCAAATTCTCATTTACTATTCCATCACTAGC 48553 | || || || | |||| ||| || | ||| ||||| || || ||||| ||| Sbjct 729703 TTTGAACTTCACTCATAAATTTAGTT--GCTAGATTTTCATTAACAATACCATCTGAAGC 729646 Query 48554 AGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT--- 48610 ||||||||||||||||||| ||| |||| |||||| || | | | ||||| Sbjct 729645 TGCAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTATTTTC 729586 Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670 ||| ||||||||||| | | || ||| | ||||| |||||||| ||||| || ||||| Sbjct 729585 CCATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCTGC 729526 Query 48671 TTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTAT 48726 || |||||||||||||||||| || ||||| ||||| || | ||||||||||| Sbjct 729525 TTGTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATCTAT 729470 Score = 131 bits (144), Expect = 2e-25 Identities = 209/295 (71%), Gaps = 5/295 (2%) Strand=Plus/Minus Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197 ||||| ||||| | |||||| ||||||||||| | |||||| ||||| || || ||||| Sbjct 730120 AAACAAGCAAAGTTACAATGTAGACCTTCATCACGACTAATCAATTCATTGGAGAATGTC 730061 Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257 | ||| ||||||| || | ||| || |||||||| || | |||| ||| || Sbjct 730060 AAACCTGGCATTAAACCTCTTTTCTTTAGCCAAAAGATGGAACAGAAACTACCACTGAAA 730001 Query 48258 AATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT 48317 || || ||||| || || |||||||| | ||||||| | || || | | || Sbjct 730000 AAGATACCTTCAACAGCTGCAAATGCCACCAATCTCTCT--GCAAATGATCTAGAATTG- 729944 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT- 48376 ||||| | ||||| || |||||||| || ||||| || || |||||||||||||| Sbjct 729943 ATCCATCTCAAGGCCCATTCTGCCTTCTTTTTCACACATGGAATAGTTTCTATAGCATTG 729884 Query 48377 AAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTA 48431 || | || ||||| || | ||||| || ||||| |||||||||||| Sbjct 729883 AATAATTTAGCTTTTTGTTCTG-GGTTTTTAATATATGTATCAATTAAAAGACTA 729830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668331098560